Cryptococcus deuterogattii: CNBG_5518
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Entry
CNBG_5518 CDS
T09796
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_5518
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_5518
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CNBG_5518
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CNBG_5518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_9
SH2
HHH_3
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
88181658
NCBI-ProteinID:
XP_062885338
LinkDB
All DBs
Position
3:1622014..1626709
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AA seq
1479 aa
AA seq
DB search
MSDRSGSASEGEGDEIRPYGEDRDSSEESEDDDPEEAKRIAEGFIVDEDEEDAEGEDEEE
DEEARRRRRKEEKRRRKKGRRMRRGREEAELSEDELELIEENRGLREGRPLKRLRRRSGS
EGSENDRAVPTLQDMFRDDEDRMEDDDDDLMDFIEEDEEDEANQGETEEQRRERRRAEKL
KRREQARSRPELTGVDRSSWDEIFAVFGDGQDYDWALEGEDGIDLDEEEEAAKKDLRLED
VFDPAEIKARRLQDEDKAVANADRPERHQIVNSTLSDNPVFATDTLYPPPDFAAKWVAPK
VSFRTQYLFCDQHPEGSYPIPTVDNPQPYPVYRRPDLEMEFEKAVSTALNMMFVQHLEVP
YLWHYKRDVFSLLENQGQSSVLFLERDELWQVYALGQRYRAIHERNEQTRQQWEKIKARK
GDIEDEYFIKGLLGKACVTSIEAAGEGAEWLAYHYASDIKAIKEEEAFDEISKKLPEKIE
HEDIRRGKIMKLVEAFGIDANKVASSFQDVNGQPAPVMNPDKMPLELADEFTGAAYSSPE
QALSAASFVLIQELSKDPAIRQQARDFMDACGLVTVNATDRGMSVIDQYHLYYNFKFLTD
KPVLAFRDSPQFIHMLKAEEEGLISIAFDIPENMLATFTDALIRCCRSNDYGEIASAWNE
VRVEACNTLVKKHLMPMASKWIKEHLRTQAEEYIAERCREELELRVNVRPYASSGMEQGE
TPSVLAITNGKGDIRDAVMAVMLDDEGNVRTQTKFDNLRDEEDKTIFIELLEKRKPKVIV
IGGFSVQTARLKDAALAAIRQHAINLLGQNPPVSDAYPDHEGFQYAMAEYDERLKAHLIP
LIFVNDATARLYMSSEEAEKEHPNLPLNGRYALGLARYTQNPLNAYCKLGRHIASVTFME
HHQKLIPQEKLLYHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYG
IQKHGALINRMAFTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIH
PENYEFAQKMCQDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQRQG
EGNKRHTLGEIVSELIRYRSDRRPPFYIPTDWEIVTMVTGETERTVGRGLKVTATVRKAL
SARVFCQLESGLDAVLERDYVADEDQAPVTSCDEVFKPRQAIKGVVIMPEPARFQVRIST
RPSDLRQGVDFVQPFKDEEYNNKDRRDAAEAATAAKKQRRAGKVQRIVNHPNWHVLNSGQ
AEQFLASQHRGDCVIRPSSKGPDRIAVTWKVDEDVYQHIDVQEIDKPNEYSLGRILMVGG
QYRYSDLDDLIINHVKATARKFDEIQMHEKYKPEHELDAFLKNYVQAHPGRSIYGFSVDS
DRPGYLKLCFLSKPTKDGGVIQTWPVRVLPGAYKLGNAIVPGVTELSNAFKMQYSEKLAE
QGHQGKTPGIYLGKTPCILAGERLPWGPGPPQWVLELLR
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaggtctggctccgcctctgaaggcgaaggcgacgaaatccgaccatatggc
gaagaccgtgactcgtctgaagaatctgaagatgatgatcctgaagaggccaagcggatt
gctgagggattcatagtcgatgaggatgaggaagacgcagaaggagaagacgaggaggaa
gatgaagaggcaagacggagacgaaggaaggaagagaaacggcgtaggaagaaggggagg
agaatgagaagaggacgagaggaagcagagctctcggaggatgagctggagctgattgaa
gaaaatcgtggacttcgtgaagggagacctttgaagagactgaggaggcgtagtgggtct
gaagggtcagagaatgacagggctgtgcccactttgcaagacatgtttcgagatgatgaa
gaccgaatggaagatgatgacgacgatctcatggactttattgaagaagatgaagaagat
gaggccaaccaaggagagacggaggagcagagaagagagaggaggagggcagagaagttg
aagagaagagaacaggctaggagccgtccagagctgactggagtggaccgatcttcgtgg
gatgagatttttgctgtgtttggcgatggtcaagattacgattgggcactcgagggcgag
gacggtattgacttggacgaagaagaagaggcagctaagaaggacctccgtctagaagat
gtgttcgaccctgccgaaatcaaagcaaggagattgcaggacgaagataaggctgtcgcc
aacgctgatcgacctgagaggcaccaaattgtcaactccacattatccgacaatccggtt
ttcgcgaccgataccctctacccaccccctgattttgccgcgaaatgggttgcgcccaag
gtatccttccgtacccaatatctcttctgcgaccaacatcctgaaggatcctatcctatt
cctacagttgacaaccctcagccttatcctgtgtaccgccggcctgatctcgagatggaa
tttgaaaaggctgtatcgaccgctctcaacatgatgtttgtgcagcacttagaggtaccc
tacctgtggcactacaagcgcgacgtattcagtttgttggaaaaccaaggacaaagctct
gtccttttcttggagcgagatgaactttggcaggtctatgctcttggacaacgctatcga
gcaattcacgaaaggaacgaacaaactaggcaacaatgggagaaaatcaaagcgcgaaag
ggtgatattgaggatgagtacttcatcaagggattgctcggtaaagcttgtgtgacgagc
attgaagcagctggtgaaggtgccgaatggcttgcataccactatgcgtctgatatcaag
gcaatcaaggaggaagaagcgtttgacgagatatcgaagaagttaccagagaagatagag
cacgaagatattcgacgagggaagatcatgaaattggttgaggcctttggtattgacgcc
aacaaagtcgcttcatctttccaggatgtcaatggtcagccggcacctgtaatgaatccg
gacaagatgcctctcgagttggcggatgaatttacaggtgcagcatactcaagccctgag
caagctctctctgccgctagctttgtccttatccaagagctgtctaaagatccagctatc
cgtcagcaagctcgagacttcatggatgcctgcggtctagttacagtgaatgccactgat
aggggcatgtcggtaatcgaccagtatcacctttactacaattttaagttcctcaccgac
aaacctgttctcgcttttagggacagtcctcaatttattcacatgctcaaggccgaggag
gagggtcttattagtattgcattcgacatccctgaaaatatgctcgcaacattcaccgat
gctctcatccgatgttgtcggtcgaacgactacggagagattgcttcggcatggaatgaa
gtcagggtggaggcttgtaatacattagtgaagaagcacttgatgcccatggcctccaag
tggattaaggaacatctcaggacccaggccgaggaatatattgctgaacgatgtcgagaa
gaattagaactgcgtgtcaatgtccgaccctacgcctcatcgggcatggagcaaggcgaa
actccctccgtccttgccatcaccaacggtaagggtgatatccgagatgccgtcatggct
gtcatgctcgatgacgaaggtaacgtccgcacacaaaccaaatttgacaacttgcgcgac
gaagaggacaagacaatcttcatagaattgctggaaaagcgaaagcccaaggtcatcgtc
attggcgggttttctgtccagactgcccgtctcaaagacgctgctctggctgctatccgc
cagcacgccataaatcttttaggtcaaaacccaccagtatctgatgcttatcctgatcac
gagggattccagtatgctatggcggaatacgacgagaggcttaaggcgcatctaattcct
cttatctttgtcaatgacgcgacggcgaggttgtatatgtcttcagaagaggctgagaag
gaacaccccaacttgcccttgaatggacggtatgctttgggtttggcaaggtacacgcag
aatcccttgaatgcgtattgcaaactgggtaggcacattgcctccgtgaccttcatggag
caccatcaaaagcttattcctcaagagaaacttctctaccatctcgaacgaggtctcgtg
aactcagtctgcttcatgggtatagaaattaactcatgtgtggctgatccttatcagcgg
gcaatgttgccatacattgcgggtctgggccccagaaaggcagatgctgttatatatggt
attcagaagcatggcgctcttatcaatcgtatggcgttcaccgacctcggtctctttgga
cctaccatcttcgaaaacactgccggtttcctcacgatagaatccgatctcaaggacatg
atgctggaagccgaaaaccctcaagagcagcccgaccctcttgatatgactcgaattcat
cccgaaaattacgagttcgcccaaaagatgtgtcaagatgcgcttgatctcgacgttgag
gatgtggcagatcgacacaagtcagaagttgtccagactcttatgcttgatgataagcga
gggaagaaactaggagagctcaacttagatgattttgctttcaatcttcaacgacaaggt
gaaggtaataagcgtcacactctcggagagatcgttagcgaattgatcagataccgatct
gatcgacgaccccccttctacattcctactgactgggagattgtgactatggttacggga
gagaccgaaagaactgttgggagaggattgaaggtgaccgcaactgtcagaaaagccctt
tccgctcgagttttctgccagcttgaatcaggtttggacgctgttcttgagcgagattac
gtcgccgacgaggatcaagctccggtcacctcttgcgacgaagttttcaagcctcgtcaa
gctatcaagggcgtcgttatcatgcctgagcctgctcgtttccaagtacgtatatccact
cgaccctctgatctccgacaaggtgtcgattttgtccaacctttcaaagatgaggagtac
aacaataaagatcgtcgagatgcagccgaggcagctaccgccgcgaagaagcagcgtaga
gcaggcaaggttcagcgtattgtcaaccaccccaactggcatgtccttaattctggtcag
gccgagcaattccttgcaagccaacatcgaggtgattgtgtcatccgaccctcatctaaa
ggtcctgatcggattgcggtgacctggaaggttgatgaggatgtttatcaacacattgat
gtgcaagagatcgataagccaaatgaatactctctgggaaggatcctgatggtcggcggt
caatacaggtatagtgacctggatgacttgatcattaaccatgtcaaagcaaccgcgagg
aagtttgatgagattcagatgcacgagaagtacaagccggaacacgagcttgatgctttc
ttgaagaactatgtgcaggcccatcctggaagaagtatctatggcttcagcgttgacagc
gatcgaccagggtacctcaagctttgcttcctcagcaagcctacaaaagacggtggggtc
attcaaacctggcccgttcgagtccttcctggtgcctataaacttggtaacgctatcgtt
ccaggtgtcaccgagctcagcaatgccttcaaaatgcaatactctgaaaagcttgcagaa
caaggtcaccaaggcaaaaccccaggtatttatctcggtaaaaccccatgcatcttggcg
ggcgaacgcctgccctggggtccaggacccccgcaatgggttctagaactcctgcgctag
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