Cryptococcus deuterogattii: CNBG_5550
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Entry
CNBG_5550 CDS
T09796
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBG_5550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_5550
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_5550
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNBG_5550
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CNBG_5550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF4479
Motif
Other DBs
NCBI-GeneID:
88181690
NCBI-ProteinID:
XP_062885370
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All DBs
Position
3:1546097..1548864
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AA seq
826 aa
AA seq
DB search
MFSFSQPKQSSSKPSQPSADNDVSMDTQGQDQTSVQTLYLKPEAYPRDGKEKWKATGRTI
SAAVGPVGGEVAVWVTKKPSDDPNKPAKLTDANPAVSDEAIIFASINSLPQPLIQLYTES
HLLFTSLQQIVADSARRRLSSVGFGVNGGAESWDTRGNFGTEGLLGPPDAETVINMRRLA
DFYVDQLGDLKTLPDIDAALRDRFIDAYNIFNIAEILYLPIDGKGEGLVGEELLDWVNEV
DVAPDNQLGNEIMSTLNSWDHPSFWPYISRSILRGFHLPAASFLRSLSSHPYAPISKLAV
LLAQHLTILPRSSEPKWRVDMDFLQAHKQWLGKFRSELAAQLGGKSEGKWFEGEWVSWEG
DFRCVVELMEGKMERILEEAGDWREALGSWGILVDVDMRRDHLPEVMSIITEKIAVDKSL
PDHVAQSALCSADIIKALMSCYSLDTWLSAHLADLLDKLSLIPDDEEHFENSLRDFFLLE
YAQVLQDNPNYKAFWRVICDYLGCAGEEGRGRLKEHLRRLDIPLERDVKGKSKESSASAN
ANEQEGLDASMDIENPTETQEEAIKLLDEVRSACVDFRLDDVWQEISQVLATRLISAGQY
GMAATLALMARDGLALSRIADKILEAFVTDGQDEYLSLVDTLPPTLLAEAPTALLHLQQS
TSNTTDFPSHSAVSVFASRITFLSEFRDYLLFLSQGARDRAAGRVVSLLTSGIAPVGFWA
VLLVESIGLLEDSEILLSSNETFELLRVLEEVYANAAFAEEDYLGQLVQYLRRTLNTTSA
KEEGQSRKKDEKTVTMEDARRKMEEVRLAISRNLARAMVAGFDSPF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgttctcattctcccagccaaaacaatcctcgtccaagccatcgcagccgtctgcagac
aacgacgtctccatggacacgcaaggacaagaccaaacgtctgtacaaactctttacttg
aaaccagaagcctatcctcgagacggtaaggaaaaatggaaggccacaggacgtacgatc
agcgctgcagtgggaccagttggtggtgaagtagctgtatgggtgactaaaaagccttca
gatgacccaaataaacctgcaaagctcactgatgctaacccagcagtctcagatgaggcg
atcatctttgcgtctatcaattctttacctcaacctctaatccaactttacaccgagtca
catctgttattcacctcccttcaacaaattgtcgccgattctgctcgacggcggctgtcg
tctgttgggttcggagtcaatggaggtgcagagtcttgggatacaagagggaactttgga
acagagggattgttgggtccgcctgatgcagagacagtcatcaatatgaggcgcttggcg
gatttctatgtcgatcaattaggagatctcaagacattgcctgatattgacgccgcgctg
agagatcgcttcattgatgcctacaacattttcaacatcgccgaaattctctatcttccc
atagacggcaagggcgaaggtcttgtaggtgaagaactcctcgactgggtcaacgaagtc
gacgtcgcacccgacaatcaactcggtaatgaaatcatgtctaccttgaattcatgggac
catccgtctttttggccgtacatctcccgctctatcctgcgtggcttccatctccccgca
gcttctttcctccgatcactttcttcgcacccttacgcgcccatctccaaactcgctgtc
ctgttggctcagcatctcactatccttcctcgatcatcggaacctaaatggagagtcgat
atggatttcttacaagctcataaacagtggctcggcaagttcaggtctgaacttgctgct
caactaggcggaaaaagtgaaggaaaatggtttgaaggtgaatgggttagctgggaggga
gatttcaggtgtgtggtggagttgatggaaggaaagatggagaggatcttggaagaagca
ggtgactggagagaagccttgggctcttggggtatacttgttgatgtcgacatgcggagg
gatcacttgcccgaggtcatgtctatcattacagaaaagattgcggtcgacaaatccctc
cctgaccacgtcgctcaatccgccctttgctctgcagatatcatcaaagctctcatgagc
tgctattctctcgacacatggctttccgcccacctcgctgatctgttagataaactgtca
ctcatcccggatgacgaggagcactttgaaaattctttgcgagacttctttttgctagag
tatgcgcaagtgttgcaagataatccaaattacaaggcgttttggagggtgatttgtgat
tacttgggatgtgcaggtgaagaaggaaggggaagattgaaggagcatttgaggaggttg
gatattcctcttgagagggatgtgaaaggaaagtccaaagaatcatccgcctctgccaac
gccaacgaacaagaaggtctcgatgcctcaatggacattgagaacccgaccgaaacccaa
gaggaagcgatcaaactcctcgacgaagtccgttctgcctgtgtcgatttccgtcttgat
gacgtatggcaagaaatcagtcaagtgctggctacgcgattgatcagcgccgggcagtat
ggtatggcggcgacgttggcattgatggctagagatggactcgcattgtccaggattgcg
gacaagatcttggaggctttcgtcactgatggtcaagacgagtatctctcccttgttgat
acccttccccctaccctcctagccgaagcacccaccgccctcttacatctccagcaatcc
acgtccaacaccaccgacttcccatcccattctgctgtgagcgtgtttgcatcgaggatt
acgttcctatcggaattcagggattatctcctgtttttgagccaaggtgcgagagatcga
gccgcggggagggtggtcagccttttaacgagtgggattgcacccgtgggtttctgggcg
gttctgttggtggaaagtattgggttgcttgaagattctgaaatattattatcttccaac
gaaacctttgagctcctgcgcgtacttgaagaagtatatgcaaatgctgcttttgcagaa
gaagattaccttggtcaactcgtccaatacctccgacggacgctcaatacaacatcagca
aaagaagaagggcaaagtcgcaagaaggatgaaaagacagtgacgatggaggatgcgaga
agaaagatggaagaggtgagattagcgataagtagaaacctggccagagcgatggtcgcc
gggttcgacagtcccttctag
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