Cryptococcus deuterogattii: CNBG_9051
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Entry
CNBG_9051 CDS
T09796
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNBG_9051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_9051
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CNBG_9051
U7-dependent histone pre-mRNA processing factors
CNBG_9051
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Motif
Other DBs
NCBI-GeneID:
88182345
NCBI-ProteinID:
XP_062886377
UniProt:
A0A0L6DI59
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Position
2:complement(1005431..1008431)
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AA seq
900 aa
AA seq
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MITLTPLSASAAETSPSEPICYLLELDDARILLDMGQRDYRASAQQNRWDYEEAVRDLAP
TLSLVLLSHSSSNYLSLYPYARARWGLTCPVYATQPTVEMGRVVCLAEAESWRSECPVES
EGEVAGDDGSKKPFKGPFVPTVEEIHEAFDWIKAVRYSQPLHLGGDFSHLLLTPFASGHT
LGGSLFKIRSPTSGTVIYAVGVNHTSERHLDGMVGVQNGPTGYVDGVLRPDLLIVEGGRS
MVINPKRKEREAALIDTITSTLESNHSVLLPVDPSPRLLELMILLDQHWTFKRTPKVKQQ
RYNEPPADLWPYPLCIVSKTAQDMVAFARSLIDWMGGVVKDSAGDMVDVGRGKRARGARM
ALGSEYGVLDFRHVQFFLNPTDLLQTYPLTRPKLVLAIPPTMSHGPSRFLFTAMANTEGN
VIMLTGRSEEQTLARDLFNRWERSQTAGSKWGEGKIGHLTHLEGKLQVEMDSKVPLSGAE
LEAHVESERLQKEKEAAHKAAVDRSRRMLEADDLESDSESESEADGLAGGITVRRTEGAN
AYAGDGEDVRTMSFDIYVKGQQMRSGRGAEMARFRMFPFVERKGRKIDQFGEGLDIGQWM
RKGREIAEEGETEEVREAKKRKEEEEEKAKQAPEPPSKYVSEEVGVELKAMIGFVDMEGL
HDGQSIKTIISDLQPRKLIIVRSSKESTQNLISFLGSVIGFTKDIFSPSLSEEIKIGEHV
QSYSLTLGDSISSTLAKKWSEFEGYEVTFVDGKIVLPAGSTIPILETPSLVGPLVKTEAE
GDEADGESKPSVEELAAASTPPVSSSAPLPLPTSTFIGDLRLARLKHRLSLLNPPIPAEF
AGEGVLVCGPGIAQEAQGAASIVSVRKIGEGKIVLEGCIGRVYVEVRKALYGGLARVDAA
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgatcactcttacaccgctctctgcctctgccgccgaaacttctccttccgaaccgata
tgttatctgctcgaacttgacgatgcccggatattgttggacatggggcaaagagactat
cgtgcgagtgctcagcaaaatagatgggactatgaagaggcggtacgagatttggcacca
actctatctctcgttttgttgtctcattcctcgtctaattacctctctctctatccgtat
gcccgagcaagatggggtctcacgtgtccggtatatgccacacagccaacggtagagatg
gggcgtgttgtttgtctcgccgaggctgaaagctggagatcagagtgtcctgtagagtct
gaaggagaagttgcaggagatgatgggagcaagaagcctttcaaggggccgttcgtcccc
acagttgaggagattcacgaggcctttgactggattaaggctgtcaggtatagtcagcct
ttacacctcggtggcgatttttcccatcttcttctcaccccttttgcctctgggcatacg
cttggtggaagtcttttcaaaatacgatcccccacatcaggtacggttatctatgccgtt
ggcgtcaaccataccagcgaaagacatctggatgggatggtaggagtgcaaaatggacct
acaggctacgtcgacggagtcttgcgtcccgaccttctgattgtggaaggaggccgaagt
atggtcatcaatccaaagcgtaaagaacgtgaagcagctctcatagatacaatcacttcc
acccttgaatcaaaccattctgtactcctcccggtggacccatcacctcgtcttctcgaa
cttatgatccttcttgaccaacattggacattcaaacgcacaccaaaggtaaagcaacaa
cgatataatgaaccacccgccgatctttggccttatccattgtgcattgtcagtaagact
gctcaggatatggtagcttttgcaaggagtctgatagactggatgggcggtgtggtcaag
gatagcgctggtgatatggtcgatgtgggtagagggaaaagagcaagaggggcacgaatg
gctcttggctcggagtatggcgtgttggattttcgacacgtccagttctttttgaaccct
accgacttgcttcaaacatatccgctaacgcgccccaagctcgttcttgccataccaccg
accatgtctcatggtccttcacgctttcttttcacagcgatggcaaacacagaaggaaac
gtcatcatgcttaccggccgcagcgaggaacagacgctggcaagggatttatttaatcgc
tgggagagatcccaaacagcagggagtaagtggggagagggtaaaataggtcatttaact
caccttgagggtaaattgcaagttgaaatggattccaaggttcccctctctggcgctgag
cttgaggcccatgtggagtcagaacgtctgcaaaaggaaaaggaagccgcgcacaaagct
gccgtagaccgttctcgacgtatgcttgaagctgatgacttggaatccgactcggagtca
gaatccgaggctgatggccttgctggaggtataaccgtgagacgaaccgagggtgccaat
gcttatgccggtgacggcgaggatgtcagaaccatgagttttgacatctatgttaaaggt
caacagatgagaagtggaaggggcgcagagatggcgagattcagaatgttcccattcgtt
gaacgtaaaggacgcaagattgatcagtttggcgaaggtcttgatatcggccaatggatg
cgcaagggacgagaaatcgctgaagaaggcgagacggaggaagtaagggaagcgaagaaa
agaaaggaagaggaagaggaaaaagcgaagcaagcgccggaaccgcctagcaagtatgtg
agcgaagaggtgggggttgaattgaaggctatgatcggtttcgtagatatggaagggttg
catgatggacaaagtatcaagaccatcatttcagacctgcagcctcgaaaattgattatt
gtgcgatcatccaaagaatccacacaaaacctcatatctttcttgggcagcgtcatagga
ttcacaaaggacatatttagcccatcgctaagcgaagagatcaagattggtgaacacgtg
caatcctactctctgacccttggtgacagcatatcctctactttggcaaagaaatggtct
gaatttgagggatatgaggtgacattcgtggatggcaagattgttcttcctgcaggatct
actattccaatcctcgagaccccctccctcgttggccctttggttaagactgaagcggag
ggagatgaagccgacggtgaatcaaaaccatcggtcgaagaactcgcagctgcctctaca
ccgcccgtctcatcatctgctcccttgcccttaccaacctcaacgtttattggggacttg
cgtcttgcccgacttaagcatcggctatctctcctcaatcctcccatacctgcagagttt
gcaggcgaaggtgtacttgtttgcggtccagggatagctcaagaggcacagggggcagca
agcatagtctcggtccggaagattggagagggcaagattgttttggaaggatgtataggt
agagtgtacgtagaagttagaaaagcgttgtacggaggtctggccagggtagatgctgcg
taa
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