Cryptococcus deuterogattii: CNBG_9065
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Entry
CNBG_9065 CDS
T09796
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03020
RNA polymerase
cdeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNBG_9065
09124 Replication and repair
03420 Nucleotide excision repair
CNBG_9065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_9065
03400 DNA repair and recombination proteins [BR:
cdeu03400
]
CNBG_9065
Enzymes [BR:
cdeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CNBG_9065
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CNBG_9065
DNA repair and recombination proteins [BR:
cdeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CNBG_9065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
88182359
NCBI-ProteinID:
XP_062886389
LinkDB
All DBs
Position
2:complement(1368408..1372465)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDADDYPLASQALDDGFTYDPDYDYTQQTAPKNDEDEEKYDVDDDEPISQEDYWTVINSF
FEEKGLVRQQLESFNEFIENTMQEIVDDHSRLTLDQFTQYTGIAGDETRRYEISFGQIYL
ARVNHTEMDGRTNMLFPQEARLRNLTYSAPLYVDIKKRTLTASGVDDPVEADWQPAVGDD
GEVESAEEEKTSIGKVPVMVRSNFCLLHGLPDDQCHEIGECPYDQGGYFIISGSEKVLIA
QERMATNHVFVFLKAAPARFTYFAEINSQKEKGGRVANHTEVRMYARASGTTGGVIRVSL
PYTKVDIPLVVVFRALGIVPDRDVLSHVCFGAEDEALLEMLQPSIEESFAVQDRDTALDF
IGRRGQHEKAPRAQRQRAAFDILHKEFLPHVSTAEGFESKKAYFLGYMVHRLCMAALGRK
ELDDRDHFGNKRLDLAGPLMAEMFNVVFGKLREDMYRYLKKCVEQNKEFALNMAIRPNTV
TDGLKYALATGNWGKRDNTRAGVSQVLNRYTFASTLSHLRRTNTPIGRDSKAAKPRQLHN
THWGMVCPAETPEGSACGLVKNLALMSYISVGSYSAPVMEFLEEWGLEDLSEYQDAPTAT
KVFVNGVWMGIHRDAPTLHNNLLQMRRGGQLKYEVSIVRDIRERELRLYTDAGRVCRPLF
IVDQPTQTLRLKRDHIDRIDQMADEGLLSGAWDKLLSEGIVEYVDAAEEETILIAMTPED
LVNARTAHSKQELVRDRAAHNLESFDPAARIKSTVWSQQYTHMEIHPSMILGVCASIVPF
PDHNQSPRNTYQSAMGKQAMGVCLTNYQLRMDTMVNVLYYPQKPLATTRSMEYLKFSELP
AGQNAIVAIMCYSGYNQEDSVIMNQSSIDRGLFRSLYFRSYTDTEKMKGMVKAETIEKPD
RNETLRMKHGTSDRYAKLDVDGLVAPGTNVNGDDILIGKTAPLPEDSEELGQRTQLHTKR
DISTPLKSTEQGVVDQVMLSTNGEGNMFVKIRVRSTRVPQIGDKFASRHGQKGTIGITYR
QEDMPFTAEGLVPDIIINPHAIPSRMTIGHLVECLLSKVSTLTGAEGDATPFTELTVEAV
SKVLRAKGYQSRGFEVLYHGHTGRKLQAQVYFGPTYYQRLKHMVDDKIHARARGPLQILT
RQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCDICGLMAVANLK
KQEFYCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRMYGETD
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagacgactacccgcttgcatcccaggccctcgatgatggcttcacttacgat
ccggattacgattacactcagcagacggctccaaagaacgacgaggatgaagagaagtac
gacgttgacgatgatgagcccattagtcaggaggattactggactgttatcaattcgttc
tttgaggaaaagggtcttgttcgtcagcagctcgaatctttcaacgagttcatcgaaaac
accatgcaagagatagtggatgatcattcgaggttaactttggatcaattcacacaatat
accggcattgcaggtgacgaaacaagacgatacgaaatttcctttggtcaaatctacttg
gctcgggtcaatcatacggaaatggatggtagaactaatatgctgttcccgcaagaagcg
cgtctcagaaacttaacttactcggcgcctctgtatgttgacatcaaaaagaggaccttg
acagcatccggggttgatgaccctgtggaagctgattggcagcctgccgtgggcgacgat
ggtgaggtggaaagtgctgaggaagaaaagacatcaatcggcaaagtaccggtcatggtt
cgctccaatttctgtctcctgcatggtcttcctgacgaccagtgtcatgagattggagaa
tgcccctacgatcaaggcggttattttattatctctggttccgagaaggttttgattgct
caggagagaatggccacaaaccatgttttcgtgttcctaaaagccgctcctgcgagattc
acctattttgcggaaatcaactctcagaaagaaaagggtgggcgggtggcgaatcataca
gaagtcagaatgtacgcaagggcatccggaacaactggtggcgtcattcgagtatctctt
ccgtataccaaagtcgacatccccctcgttgtggtctttcgagctttgggtattgtacct
gatagagacgttctcagccatgtctgctttggcgccgaagatgaagcccttcttgaaatg
cttcaacccagcattgaagaatcttttgctgtacaagaccgtgacactgctctcgacttt
atcggtcgtcgtggtcaacatgaaaaggctcctcgagcccagcggcagcgtgcagccttt
gatatccttcacaaagagtttttgccacacgtatctaccgccgaaggatttgagtccaag
aaggcgtacttccttggctacatggtgcataggctatgtatggcggcactaggaagaaag
gagttggatgacagagatcattttgggaataaaaggttggaccttgcagggccgttgatg
gcggagatgttcaatgtagtgtttgggaaattgagagaagacatgtacagatatctgaaa
aagtgtgtcgagcaaaataaggagtttgcccttaacatggctattcgccctaacacggtt
accgacggtctcaaatacgctcttgctacaggcaattggggcaagcgggacaatactcga
gcaggtgtatcgcaagttctcaatagatatacttttgcttctaccctctcccatttgcgg
cgtactaacacgcccatcgggcgtgactcaaaggccgctaagccacgtcaacttcacaac
acccattggggcatggtttgtcctgccgagacgcctgaaggctccgcgtgtggtcttgtc
aagaatctcgcacttatgtcttacatttcagtggggtcttattcggctccagtcatggaa
tttttggaagaatggggtctggaagatctttcagaatatcaagatgcgcccactgcgacc
aaagtatttgtcaatggtgtctggatgggtatccatcgagacgcacccaccttgcacaac
aacctcttgcaaatgcgccgtggtggtcagctcaaatacgaagtcagtatcgtacgagat
atcagagagagagagctacgcttgtacaccgatgcgggacgtgtctgtagaccgcttttc
attgtcgaccagccaacgcagacattgcggctcaaacgtgaccacattgacaggatcgac
cagatggcagatgagggtcttttgtcaggagcgtgggacaagctattatccgagggtatt
gtcgaatatgtggacgcagctgaggaggagaccatattaatagccatgacgcctgaagat
cttgtgaacgctcgcactgcacacagcaagcaagagcttgtaagggacagggcagcccac
aatcttgaatcctttgatcctgcagctcgtatcaagagtacggtgtggagccagcagtat
acccacatggagattcatccgagtatgattcttggcgtctgcgctagtatcgttcctttc
cccgaccataaccaatctcctcgaaatacctatcagtctgcgatgggcaaacaagccatg
ggcgtctgcctcaccaactatcagcttcgtatggatactatggtcaatgtgctgtactat
cctcaaaaaccacttgccactactcgttcaatggagtatctcaaattctctgagcttcct
gctggtcaaaacgcaattgttgccatcatgtgttattctggttacaatcaggaagactct
gtaattatgaaccagtcatcaatcgaccgcggtcttttccgatcgttgtacttccgttcc
tacactgatacggagaagatgaagggtatggtcaaggcggagacaattgagaaaccagac
aggaatgagacattacgaatgaagcatggaaccagcgatcggtacgccaaacttgacgtc
gatggccttgttgctccgggaacaaacgtcaacggtgatgatattctcattggcaagact
gcacctttgcctgaagacagcgaggagctcggtcaaaggactcaacttcacacaaagcga
gatatatctacaccgctgaaaagcacggagcagggcgttgttgaccaggtcatgctgagt
accaacggagaaggtaacatgtttgtcaagattcgtgtgagatctacaagagtgccgcaa
ataggtgacaagtttgcttcccgacacggtcagaaaggtactatcggtatcacctatcgc
caagaagacatgccgttcactgcggagggtcttgttcctgatatcatcatcaatccgcat
gctattccttctcgaatgactattggccatttggttgaatgtcttttatcaaaagtgtca
actctaactggagctgaaggagacgctactcccttcacggagctgactgtcgaagctgtt
tccaaagtcctgcgagcaaaagggtaccaatctcgtggttttgaagttctttatcatggt
catacggggagaaaactccaggcccaggtctactttggacctacctactatcaaagacta
aagcatatggtggatgataagatccacgctcgagcacgtggacccttgcaaattttaacg
agacagccagtagaaggtagaagtagagacggtggtctgcgatttggtgaaatggagaga
gactgcatgatttcgcatggtatcgctggatttttgaaggaaaggatgtatgattcttcc
gatgcgttcagaatacatgtttgcgacatctgtggtctcatggctgttgccaatctcaaa
aaacaagagttctactgctctgtctgcaggaacagtacgcagatctcccaggtgtacatc
ccgtatgctgccaaattgctgttccaagaattacaagccatgaacattgcatgtcgaatg
tatggggaaacggattga
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integrated database retrieval system
