KEGG   Cryptococcus deuterogattii: CNBG_9293
Entry
CNBG_9293         CDS       T09796                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNBG_9293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cdeu03041]
    CNBG_9293
   04121 Ubiquitin system [BR:cdeu04121]
    CNBG_9293
Spliceosome [BR:cdeu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    CNBG_9293
Ubiquitin system [BR:cdeu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    CNBG_9293
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 88182561
NCBI-ProteinID: XP_062886270
LinkDB
Position
8:322480..324773
AA seq 680 aa
MSMNKESLTDEEAIQLRLQLGLSAPGVTAADGGEPPVDTDAIAEENYAQRKAEMKREKEE
RELKERIEKARNKSALNAKLKGATLSAPSTDDSLDAKSWIKKQKKREKQRAREIAAMQAR
DKEEQDRLMYGEEDLAGLKVGHGVEEFEEGEDVILTLKDTGVLEGGEDELQNVNLVEDAA
IKAAKERKRKAQQAYTGYDDEEFDENRIGRRADVLGKYDEDFASGKVRTEGFRLGAPVEK
KMKIQDEDEGMGIAPAQKVKLSLDYTKEFEVSDYAKEGEAGFKKPKKKKAKRSTRRAEAE
EDTMEVDGEPTFTRRVVTEGPDNLVDDDDLQAALSRARRANAKKKPKIKPEDVAAQIAQR
KQEEGGQVKEEEDGEDDGRITFDETSEFVRNVSLESRAVSIKRERISPPPSGVTPTPAEV
GPSEEPVVVKIERREEGEVDDEDDEMGEEDADLAEIAAREGMSLEEYREKIDRQMKEMED
MKKEAKDEDEPEPIVGHGMAGVLALLRHQGALKARTAEDEERERVQKQKDLWLADYRRRM
AQRELERIQARGGNKDQAQREWENRMREQQEARDALDIYKNYKPDVNIVYHDEFGRQMTP
KEAWKSLSHKFHGKTSGRMKTEKRLKKIAEERKQLTMNSSDTPLGMTDAFSRRQQMTGEA
HMVLSVGNKQSVQAGSSRRR
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgtccatgaacaaggaatccctcacagatgaggaagctatccagctccgtctccaactc
ggtctttcagcccccggcgttactgcagcagatggaggcgaaccacctgtcgacacagat
gccatcgcggaggaaaactatgcgcaaaggaaagcagaaatgaagcgcgagaaggaggag
agggagctcaaggagcgtatagagaaagctcgtaacaagtctgccctcaatgccaaactc
aaaggtgcaactctctccgctccctcgactgacgatagcctcgatgccaagtcgtggatc
aaaaagcaaaagaagcgtgaaaagcaacgagcgcgggagattgctgcgatgcaagctcga
gacaaggaggaacaggacaggctgatgtatggggaagaagatctcgcgggccttaaggtt
ggacatggggtagaggaatttgaagaaggagaggatgtaatcctcacattgaaggatact
ggcgtgttagaaggtggagaagatgagctgcaaaacgtcaatcttgtcgaagatgctgcg
atcaaagctgccaaggagagaaaacgcaaagcccagcaagcgtacacgggatatgatgat
gaagagtttgacgagaatcggatcggacggcgagcggatgtgttgggcaagtatgatgag
gactttgccagcgggaaggttagaacggagggatttaggctaggggcacctgtggaaaag
aagatgaagattcaggatgaggatgaagggatgggcattgcaccagctcaaaaagtcaag
cttagtttggactacacaaaagagtttgaagtgtcggactacgccaaggaaggcgaggcg
gggttcaagaagcccaagaaaaagaaggccaaacgatctacccgccgtgccgaagcggaa
gaggataccatggaagttgacggcgaacccacattcacccgaagagtcgtaaccgagggt
ccagacaaccttgttgacgacgacgatctacaagctgccctttcccgtgccagacgtgct
aacgctaagaagaagcccaagattaaacctgaagatgttgctgcgcagattgcccagcgg
aagcaagaggaaggagggcaagtcaaggaggaagaggatggagaggacgatggaagaatc
acctttgacgagacgtctgaatttgtcagaaacgtgtctttggagtctcgggccgtttct
atcaagcgcgagcgcatttctcccccgccatctggggtaacccctactcctgctgaggtt
ggtccgtccgaagaacctgtcgtggtcaagattgaacgccgtgaagaaggagaagttgac
gacgaggatgatgagatgggtgaagaagatgcggatctcgcggaaattgctgccagggaa
gggatgtcacttgaagaatatagagaaaagattgatagacaaatgaaggaaatggaagac
atgaaaaaggaagcgaaagatgaggatgaacccgaacccattgttggccatggtatggct
ggtgtcctggcccttcttcgacatcaaggtgccctcaaagctcgcaccgccgaagacgaa
gagcgcgagcgcgtgcaaaagcaaaaggacttgtggctcgcagattaccgtcgacgtatg
gcgcagcgcgagttggagagaattcaggccaggggcggcaacaaggatcaggcacagagg
gagtgggaaaacaggatgcgggagcagcaagaggcaagggatgctttggatatttacaag
aactacaagcctgacgtgaatattgtgtatcacgacgagtttggaaggcaaatgacaccc
aaggaagcatggaagagtctttcccacaagttccacggcaagacctcaggtcgaatgaag
accgaaaagcgcctcaagaagattgccgaggagcgcaaacaactcaccatgaattcctca
gatactcctctcggtatgacggacgccttttctcgccgacagcaaatgaccggtgaggcg
cacatggttttgagtgttggaaacaagcagtcagtgcaggcgggtagcagcagaagacgt
tag

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