Campylobacter devanensis: CIGN_0782
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Entry
CIGN_0782 CDS
T10324
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cdev Campylobacter devanensis
Pathway
cdev02020
Two-component system
cdev02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cdev00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CIGN_0782 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CIGN_0782 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdev03021
]
CIGN_0782 (rpoN)
Transcription machinery [BR:
cdev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CIGN_0782 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_23
HTH_5
Calici_PP_N
HTH_IclR
MarR
DUF6290
GatB_Yqey
KorB
FilR1_middle
LacI
Motif
Other DBs
NCBI-ProteinID:
ARQ99071
UniProt:
A0A1X9SS58
LinkDB
All DBs
Position
780024..781262
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AA seq
412 aa
AA seq
DB search
MKLSQKLTAKTKLNQTLRSWLPILQVASDELKETLEPFIEKNPFVQLEPNPKSRSLNFYS
DIYKTSISDTIESSIIYKESLYEKLSSQIDDKLFPSKKSKEIANLIIECINSEGYFEWDD
GIFIGFSKDEVERVRARFAYLEPVGVGAVDYKESFIFQLDELCDNDEIYELCVEIIQNFE
NISKFTKRKNYEAAMSLLKKFKNPPAIEYMDNEMLVIPDIFVYDSDGGIEVAINDEFYPN
IHIDIEGIDEKSEFVSSKIKEAKDLIDALEMRKSTLHKIGLMIIEYQYDYFFGGDIKPMK
LKDIAEDLGRNPSTISRAIQNKYLSSKRGIVPLKNFFAAAAAEEVSNAAIKEFLLNLIKN
ENRAKPLSDEAILAKIEDEFNIKLVRRTITKYRKMLNIASSSERKKLYAIQG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctctcaaaagctcactgcaaaaactaaattaaatcagactctacgtagctgg
ttgccaattttacaggttgctagtgatgagttaaaggagactttagaaccatttatcgag
aaaaatccatttgtacagcttgagccaaacccaaaaagtagatcgttaaatttctacagc
gatatctataaaacaagtattagcgatactatagaatctagtatcatttataaagagagc
ttgtatgaaaagctaagttcgcaaattgatgataaattatttccatctaaaaaatccaaa
gagattgcaaatttgattatagagtgtattaatagtgaaggttattttgagtgggatgat
ggaatttttataggatttagtaaagatgaagttgagcgagttcgtgctagatttgcctat
ttagagcctgttggggtgggggccgtagattataaagagagttttatatttcaacttgat
gagctttgcgataatgatgagatttatgagctttgtgttgaaattattcaaaattttgaa
aatataagcaaatttacaaagcgtaaaaattatgaagctgctatgagcttactaaagaaa
tttaaaaatcctccagcaattgagtatatggataatgagatgttggtaatacctgatata
tttgtctatgatagtgatggcgggattgaagtagctataaatgatgaattttatccaaat
attcatatagatattgaaggtatagatgaaaaaagtgaattcgtctcaagtaaaataaaa
gaggcaaaagatctaattgatgctttagagatgcgtaaatccacacttcataaaattggc
ttaatgataatagagtatcaatacgactacttttttggtggcgatataaagccgatgaaa
ttaaaagatattgctgaggatttaggtagaaatccatctacaattagccgtgcgatccaa
aataaatatctaagctcaaagcgtggaatcgtcccgcttaaaaacttctttgccgcagcc
gctgccgaggaggtttcaaatgctgctattaaggagtttttattaaatttaattaaaaat
gaaaatagggctaagccacttagtgatgaggcgattttggctaagattgaagatgaattt
aatatcaagctagttagaagaacaataaccaaatatcgcaaaatgctaaatatcgctagc
tcaagcgaacgcaaaaaattatacgcaattcaaggataa
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