Campylobacter devanensis: CIGN_1220
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Entry
CIGN_1220 CDS
T10324
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cdev Campylobacter devanensis
Pathway
cdev03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIGN_1220 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdev03400
]
CIGN_1220 (uvrB)
DNA repair and recombination proteins [BR:
cdev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIGN_1220 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CIGN_1220 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
SWI2_SNF2
UB2H
AAA_22
HAAS
Microtub_bd
MG185_MG260
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARQ99482
UniProt:
A0A1X9STD6
LinkDB
All DBs
Position
1213663..1215639
Genome browser
AA seq
658 aa
AA seq
DB search
MDKFDLNSKFSPSKDQQNAINNIVNAFKNGAKYSVLLGVTGSGKTFTMANVIKQLNIPTL
IMTHNKSLAAQLYSEFKGFFPHNHVEYFISYYDYYQPEAYIPRQDLFIEKDSAINDELER
LRLSATANLLEHDDTIVIASVSANYGLGNPAEYKGMVITLERGMQISQKELLLKLVDMGY
KRNDSYFDRADFRVNGDVVDIYPAYFCDEAIRLEFFGDEIEEIYHFNALENKKTKNLNKF
ILYATSQFVVGENRLKEAIKGIEAELDERLKFYENQGRMVEYQRLKQRVEFDLEMLATTG
STKGVENYARYLTGQKAGETPYSMFDYFEMNGQDYLIIVDESHVSLPQFRGMYAGDRSRK
EILVEYGFRLPSALDNRPLKFDEFIVKKGKFLFVSATPNEYEIQLANNHIYEQILRPTGL
LDPEIEVISSDNQVEVLYDRAKAVIERGERVLITTLTKKMAEELTRYYLELGLKIKYMHS
DIDAVERNELIRGLRRGDYDILVGINLLREGLDLPEVSLVAVMDADKEGFLRSKTSLIQT
MGRAARNVNGKVILFANKITSSMREAIDITSARRKYQDEYNKANGITPKSASRNIEDSLK
EDDTIELYTKAKKLEKMPANERAKMIKELRTMMMEAAKNLEFEKAAALRDEIAKLRQI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattcgatttaaatagcaaattttcacctagcaaagaccagcaaaacgccatt
aacaatattgtaaacgcatttaaaaatggtgcaaagtatagcgtattactaggcgtaaca
ggtagtggcaagacatttaccatggcaaatgtaataaagcagttaaatatcccaacacta
attatgacacacaataaatccctagccgctcagctatatagtgaatttaaaggctttttc
ccacacaatcatgtggagtattttataagttactatgactactatcagcctgaggcatat
atcccaagacaagatttatttatagaaaaagatagcgctataaacgatgaactagagcgc
ctaagactatcagctacagcaaatttactcgaacacgatgatactatcgtgatagctagc
gtatcagcaaattatggtctaggtaatccagccgaatacaaaggtatggttattacttta
gagcgtggtatgcaaattagccaaaaagaactacttttaaagctagttgatatgggttat
aaaagaaatgatagctactttgatagggctgattttcgtgtaaatggtgatgtagtagat
atctatccggcatatttttgcgatgaagctattagactagagttttttggtgatgaaatt
gaagagatttatcactttaacgcattagagaataaaaaaactaaaaatttaaataaattt
attctatacgcaacaagtcaatttgtagtcggagaaaatcgcttaaaagaagcgattaag
gggattgaggctgaactagatgaaagacttaaattttatgaaaatcaggggcgaatggtt
gaatatcaacgacttaagcaacgggttgaatttgatctagaaatgctagctaccactgga
agcacaaagggcgtagaaaactatgctagatatcttaccggtcaaaaagcaggagagaca
ccatactcgatgtttgattattttgaaatgaatggacaagattatctaattatagttgat
gaaagccatgttagcctgccacaatttcgtggaatgtacgcaggcgatagaagtagaaaa
gagatcttagtggagtatggatttagactgcctagcgcactagataatagaccgctgaaa
tttgatgagtttatagtcaaaaaagggaaatttctctttgtctctgctacgccaaatgag
tatgaaattcagctagcaaacaatcatatatatgagcaaattttacgcccaactggcctg
ctagatcctgaaattgaggtaattagtagtgataatcaagttgaagttctttatgataga
gcaaaagctgtaatagaacgaggcgaaagagtgctaataactactttaacaaaaaagatg
gccgaagagttaacaagatactatctagagcttggattaaaaatcaaatatatgcactca
gatattgatgctgtggagcgaaatgagctaatacgcggcctaaggcgtggggattatgat
attttagttgggataaatttacttcgtgagggattagatcttcctgaggtgagtctagta
gcagtaatggatgcagataaggaaggattcttgcgttctaaaactagcttaatccagaca
atggggcgagctgctagaaatgtaaatggcaaggtgattttatttgctaataaaattact
agttcaatgcgtgaagctattgatattacctctgcacgccgcaaataccaagatgaatat
aataaagcaaatggtatcacaccaaaaagtgcaagtcgcaatatcgaagatagtttaaaa
gaggatgatactatagagctttacactaaggctaaaaagcttgaaaagatgccagctaat
gagcgtgctaagatgatcaaggagctaagaactatgatgatggaagctgctaaaaatctt
gagtttgaaaaggcagccgcactgcgtgatgagattgctaagttacgacaaatttaa
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integrated database retrieval system
