Campylobacter devanensis: CIGN_1377
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Entry
CIGN_1377 CDS
T10324
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cdev Campylobacter devanensis
Pathway
cdev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIGN_1377 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdev03021
]
CIGN_1377 (rho)
03019 Messenger RNA biogenesis [BR:
cdev03019
]
CIGN_1377 (rho)
Transcription machinery [BR:
cdev03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CIGN_1377 (rho)
Messenger RNA biogenesis [BR:
cdev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CIGN_1377 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
ATPase_2
Ploopntkinase3
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ARQ99631
UniProt:
A0A1X9STP6
LinkDB
All DBs
Position
1361799..1363127
Genome browser
AA seq
442 aa
AA seq
DB search
MENKETAQQSNQPTKKQHTRTHTPVDGYKIEELRLQDLDSLVAIAEEVGVQNPREFRRQE
LVFEILKAQTKQGGFILFTGILEIVEGGYGFLRSTDANLSDSANDTYVSLSQIKKFALRV
GDIITGQVREPREQEKYYALLKIEAINYKSIAEAKERPLFDNLTPLFPNQKIQLEYDPMK
LTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELAHGITRNHPEVELIVLLIDERPEEV
TDMQRSVRGEVFSSTFDLPASNHVRVAELVIEKAKRLVEMGKDVVILLDSITRLARAYNT
VTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFK
GTGNSEIILDRTISDRRIYPAVNILKSGTRKDELLQGSDDLGKIWAIRNIIATMDDIEAL
KFLYSKMLKTKNNKELLSIMNE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaggaaactgctcaacaatcaaaccaaccaaccaaaaaacaacacacacgc
acacacacgccagttgatggctataaaatagaagagttaagactccaagacttagatagc
ctagtagcaatcgccgaagaagtaggcgtccaaaaccctagagaatttcgccgccaagag
ctagtatttgaaattttaaaagcccaaaccaagcaaggcggatttatcttatttactgga
attttagagatagttgagggcggatatggctttttacgctctactgatgcgaatttgagt
gattctgctaatgatacatatgttagcctaagccagattaaaaaattcgccctaagagtc
ggcgatatcataaccggacaagtaagagagccaagagaacaagagaaatattacgctctt
ttaaagatagaagcgataaattataaatccatagccgaagccaaagagcgcccattattt
gataacctaactccgctatttccaaatcaaaaaattcaattagaatatgatccaatgaag
cttacaggtcgtgtgcttgatcttttcaccccgataggcaaggggcaaaggggacttata
gttgccccacctagaacaggtaaaactgagcttatgaaagagctagctcacggcattaca
agaaatcatccagaagttgagctaatagtgcttttaatagatgagaggccagaagaggtt
acagatatgcaacgcagtgtgcgtggtgaggtatttagctctacatttgacttaccagcg
tcaaatcatgtaagggtagccgagttggtgatagaaaaggctaaaaggctagtagagatg
ggaaaagatgttgtgatattgcttgatagcattactcgccttgctagagcgtataacaca
gtaaccccaagtagcggtaaggttttaagtggtggtgtggatgccaatgcccttcataaa
ccaaagagattttttggtgcagctagaaatatagaaaatggcggaagtctaacgatagta
gcgactgctttgatcgatacaggttctagaatggatgatgtgatatttgaagagtttaaa
ggcacgggtaatagcgaaattatcttagatcgcaccatttcagatcgtagaatttatcca
gctgtaaatatactcaaatctggcactagaaaagatgaattactacaaggtagcgatgat
ttaggcaaaatttgggctatacgaaatattatagctactatggatgatatagaggctctt
aaattcctatactctaaaatgttaaaaaccaaaaacaataaagagcttttaagcataatg
aatgaataa
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