Clostridioides difficile 630: CD630_00330
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Entry
CD630_00330 CDS
T00487
Name
(GenBank) putative glycoside hydrolase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf00520
Amino sugar and nucleotide sugar metabolism
cdf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CD630_00330
Enzymes [BR:
cdf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
CD630_00330
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Glyco_hydro_32N
Motif
Other DBs
NCBI-ProteinID:
CAJ66847
UniProt:
Q18CB9
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Position
53912..55558
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AA seq
548 aa
AA seq
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MIKNPILPGFNPDPCICRKGDDYYLVVSSFEWFPGIPVYHSKDLKNWELYTHILTDETKI
DLKKLPSSKGIWAPCLTYCEEEDLFYIVYGIMNSMNARYFDVDNYLITSKDIKGEWSEPV
YLHSSGFDASIFHDDDGKKWIASLDWETREGYEKPGVICLVEYCTKKKEIVGYPKRIWSG
GTDRGCIEAPHITKRGDYYYIMCAEGGTGYGHSVTMGRAKNIWGPYEKDSMNPIVTSIPG
DFYERHDPDHLKPKYYNPESKLQKSGHGSYIETTSGEVYLVHLTSRPFVPELRCTLGRET
AIQKMKWTKDNWLRMEDESNLAKEYVSESKLEEHLVSSIPSFDDFDSNELGLQYYAPRIS
PLSFADVKSRPGYVRIRGQESRTSLNKVSILARKLTSVYARITTKMEFYPEVHQHSAGLI
MYYDNMNYINLRKYYSETLGQSALSIIHLENGEKTEFLNTRIPIKDIPIYLRLYIQGRKS
YFEWSYDEKNYQRIGKVFDTTKFSDEYCKYGEFTGTFIGLTCADRVKHKHYADFDFFEYI
VDESKDVD
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaccctatacttccaggttttaatccagatccttgtatttgtagaaaggga
gatgattattatcttgtagtttcatcttttgaatggtttccaggtatacctgtttatcac
tctaaagacttaaaaaattgggagttatatactcatattttgacagatgaaacaaaaata
gatttgaagaagcttccttcatctaaaggaatttgggcaccttgtttgacttattgtgaa
gaagaagatttattttacatagtttatggaattatgaactctatgaatgcaagatatttt
gatgttgataattatttaattacatcaaaagatataaagggagagtggagtgaaccagta
tatctacactcatcaggttttgatgcgtctatttttcatgatgatgatggtaaaaagtgg
attgcatcattagactgggagactagagaaggatatgaaaaacctggtgttatatgttta
gtggaatactgtacaaaaaagaaagaaatagtaggatatccaaagagaatatggtcaggg
ggaactgatagaggttgtattgaagcaccacatataacaaagcgtggagattactattat
ataatgtgtgcagaaggtggaactggatatggtcatagtgtaactatgggaagggctaaa
aatatatggggaccttatgaaaaagattcaatgaatccaattgtaacttcaattccaggc
gatttttatgaaagacatgaccctgaccatctaaagcctaaatattataacccagaatca
aaacttcaaaaatctggtcatggaagctatatagaaacaacatcaggtgaagtatattta
gttcatctaacatctagaccatttgtaccagagttaaggtgtactttaggtagagaaaca
gctattcaaaaaatgaaatggacaaaggataattggcttcgaatggaagatgaaagtaat
ttggcaaaagaatacgtatcagaaagtaaactagaagaacatttagtttcatctatacca
agttttgatgactttgattcaaatgaattaggtttacagtactatgctcctaggatttca
ccattatcatttgcagatgttaagtctagaccaggatatgtaaggattagaggacaagaa
tcaagaacatcattaaataaagtaagcatattggcaagaaaattaacttcagtatatgca
agaataaccactaagatggagttttacccagaggtacatcagcatagtgcgggtttgata
atgtattatgataatatgaattatataaatttaagaaagtattatagtgaaacattgggt
caaagtgcactatcaataatacatcttgaaaatggagagaagacggaatttttaaatact
aggataccaataaaagatataccaatatatcttcgtctgtatatacaaggtcgtaagtca
tattttgaatggagttatgatgaaaaaaactaccaaagaataggaaaggtatttgataca
actaagttttcagatgagtactgtaaatatggagaatttacaggtacgtttataggatta
acttgtgcagatcgtgtaaagcataaacactatgctgattttgatttttttgaatatata
gtagatgaatcaaaagatgtcgattaa
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