Clostridioides difficile 630: CD630_01240
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Entry
CD630_01240 CDS
T00487
Symbol
spoIID
Name
(GenBank) Stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdf01011
]
CD630_01240 (spoIID)
Enzymes [BR:
cdf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CD630_01240 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
cdf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CD630_01240 (spoIID)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
CAJ66944
UniProt:
Q18CL6
Structure
PDB
PDBj
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All DBs
Position
169522..170586
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AA seq
354 aa
AA seq
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MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEK
NTVNYETVNKKAPIINVYNHITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAART
YVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNGEEWIKNKYSKIQEAVRGTKG
QIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKSVESPYDKYSPKFASTLKISNTD
FVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLGNKELTGKDIRTVFKLNSANF
DIKFGEGYIDFVVKGYGHGVGMSQWGAEGMAEEGYKYYDILSHYYTDTKIKDIY
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacccattggttgttttgttaggatttgtgacttgctctgtgttagttccatca
cttataactttagtttcttataaaaatgtagaattaactgaaaaaccagagagcccagta
tctataaacaaaactattaaaaaaagtgatattgaagacaaaggtaataaagaagaaaaa
aatacagtgaactatgaaactgtaaataaaaaagcaccaattatcaatgtatataatcat
ataacagggaaaaccgaaaagatggacatggagaactatttatgtggagtactagctggt
gagatgtcttcagagtttgatatagaagctttaaaagctcaatctgtagcagctagaaca
tatgtagtatataaacaagaacatggtaaatctagtaaacataaaaatgcagtagtatgt
actgattataaacattgtcaagaatataagagttatgatactcttaaaaaattaaatggt
gaagaatggattaagaataaatattccaaaatccaagaagcagttagaggaactaaaggt
caaataataacttataatgataaggcgatacttcctctttatttttctacatcttcagga
aaaacagaaaatagtgaagaagtattttctgcaaaatatccttatttaaagtctgtggaa
agtccttatgataagtattcccctaaatttgcgtcaacacttaaaataagtaacacagat
tttgttaaaagtcttagaagggcatatagcactattgtgatagatgtgaataatttaagt
aaacaagtttcaataactaaaagaagtgatgccggaactgtagaaaaaataaaattagga
aataaagaattgactggaaaagacattagaactgtttttaaattgaactctgcaaacttt
gacataaaatttggagaaggatacatagatttcgtggtaaaaggatatggtcatggtgtt
ggtatgagccagtggggagcagaaggaatggcagaagagggctataaatattatgatata
ttatcacattactacacagatacaaaaataaaagatatatactaa
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