Clostridioides difficile 630: CD630_04410
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Entry
CD630_04410 CDS
T00487
Name
(GenBank) Transcriptional regulator, sigma-54-dependent
KO
K06714
arginine utilization regulatory protein
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdf03000
]
CD630_04410
Transcription factors [BR:
cdf03000
]
Prokaryotic type
Helix-turn-helix
Other families
CD630_04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
AAA_3
PAS_4
Mg_chelatase
PAS
Motif
Other DBs
NCBI-ProteinID:
CAJ67267
UniProt:
Q188N1
LinkDB
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Position
524357..525757
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AA seq
466 aa
AA seq
DB search
MNQEIFFKIMNEILENIDEGVHFVNKDGKTIIYNNSVQKMEKMNRHDILTNSFFDIVNKM
KINRSTLLEVLEKREVIKDNIQKYLDKNGKEITAINTTIPIDIKGEFVGALEISKNMTTI
ENLLNRNYKKNLVNKVSSRQKKGYEFDDILGESNLIKEAIAKSKKACKSDASVFIYGETG
TGKELFSQSIHYGSNRRNYPFIAQNCAALPESLFEGILFGTSKGGFTGAIDRPGLFEQAN
KGTLLLDEINSMPIMLQAKLLRVLQEGYVRRVGGTKDIPIDVRIIATTNESPKVILNEHK
MRKDLYYRLNIIHIKIPPLRDRKEDIPLLCKKFISKYNKKLNKKVVGISDEAIKILKNYD
WQGNIRELENIIYCTMSMMEDEVQIETSMINLNDYYNLKENKESNNYSLNDLEDKTLSKI
ISEIEEKYIYESLEKASYNITKAASILGMNRQNLQYKIKKYNIKIL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccaagagatattttttaaaataatgaatgaaatattggaaaatattgatgaaggg
gtacattttgttaataaagacgggaaaactataatctacaataattctgtacaaaaaatg
gaaaaaatgaacagacacgatattttaaccaattcattttttgatatagtcaacaaaatg
aaaataaacaggagtacactattagaagttttggaaaaaagggaagttatcaaagacaat
attcaaaaatatctggataaaaatggaaaagagataacagcaattaatactacaatacca
attgatattaaaggcgagtttgtaggggcacttgaaatatcaaagaatatgacaacgata
gaaaatttactaaacagaaattataaaaaaaatttagtcaataaagttagtagtagacaa
aaaaagggttatgaatttgatgatattttaggggaaagtaatttgattaaagaagcaata
gctaaatctaagaaagcttgcaagtctgatgcttcagtatttatatacggtgaaactgga
acgggtaaagagttatttagccagtccattcactatggaagtaataggagaaactatcca
tttatagcacaaaattgtgcagctttgccggaatcactattcgaaggtatcctttttgga
actagcaagggaggatttacaggagcaatagataggccaggtttatttgaacaagctaac
aaagggacattgttattggatgagataaattccatgcctattatgttacaggctaaacta
ttaagggttttacaagaaggttatgtaagaagggttggaggaactaaggatatacctata
gatgtaagaattattgcaacgacaaatgaaagtccaaaggtaattttaaacgagcataaa
atgcgaaaagatttatattataggcttaacataattcatataaaaattcctcctcttaga
gatagaaaagaggacatacctctattgtgcaaaaaatttatttcaaagtataataaaaag
ttaaataaaaaagtggtaggaatttcagatgaagctattaaaattttaaaaaattacgat
tggcaaggtaacataagagagctagaaaacataatttattgtactatgagtatgatggaa
gatgaggtacaaatagaaacaagtatgattaatctaaacgactattacaatcttaaagag
aataaagagagtaacaattattctttaaacgatttggaggacaaaacacttagtaagatt
atcagtgagatagaagaaaagtatatatatgaatcattagaaaaggcatcttacaatata
actaaagctgcatcaattttaggtatgaataggcaaaatttacagtataaaataaaaaaa
tataatatcaaaatattataa
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