Clostridioides difficile 630: CD630_07490
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Entry
CD630_07490 CDS
T00487
Name
(GenBank) putative DNA helicase, UvrD/REP type
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf03420
Nucleotide excision repair
cdf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD630_07490
03430 Mismatch repair
CD630_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdf03400
]
CD630_07490
Enzymes [BR:
cdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD630_07490
DNA repair and recombination proteins [BR:
cdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD630_07490
MMR (mismatch excision repair)
Other MMR factors
CD630_07490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_12
AAA_11
MNE1
PcrA_UvrD_tudor
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
CAJ67583
UniProt:
Q189U3
LinkDB
All DBs
Position
914910..916976
Genome browser
AA seq
688 aa
AA seq
DB search
MVELIITTNIDIRKLNENQLEAVEHIDGPCMILAGPGSGKTRVITYRIANMVVNKNIAPT
RILAISFTKASSIEMKNRALNLSDDIRLNKVTYGTFHSVFFKILRYFERYNLDSIFDEKS
KRMTIKAILKSLNIENADDDENIGQVINEISYVKNELMDKNEFNSEVLTKDEFLKVYNLY
EEQKSKVNKIDFDDMLIRTYYLLLNNKSALEMVRNVYKYILIDEFQDINKVQFEVLKLIC
SPLNNIFAVGDEDQSIYGFRGARPDFLLEFEQYFNNTKKIILDINYRSKSEIVHTANRLI
DKNKNRYEKIIKCSQGDGGSVTYISPHDSEEEALYIAREIIDEIQKDYVEYSDFAVIYRT
NIQSRALVDVFMDMRIPFVVKDSVITIYDHWASQDILAYLRIGINPKSNKDWLRIINKPF
RYISKDSINMVKDEKDFITALINKCNLHPKQVKTINDLEIDLSYLNTLNPKNAISYIRTS
LDYDRYVLDYCSNRKIKTNGLVEILNELESSATNFNTVTEFLEHIDRVKTELTENNKNKQ
TEGVIFTTMHSAKGLEFRNVYIIGVNEGTIPHEKSYDICKEEKKEEQLEEERRLMYVAIT
RAEEKLCISSTLNKYGKKVDKSLFINDIKSPTKKEIDSIDVGDKVYHKKFHEGEIIKKDG
IMFTIKFKDRERILDLKTCLLKNIIYTI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtggtggagctaataatcacaacaaatatagatataagaaagttaaatgaaaatcaatta
gaagcagttgagcatatagatgggccttgcatgatacttgcagggcctggttcaggtaag
accagagtaattacatatagaatagccaatatggttgtaaacaaaaacatagcaccaaca
agaatcttggcaataagttttaccaaggcatcttcaatagaaatgaaaaatagagctttg
aatttaagtgatgacataagacttaataaggtaacctatggtacttttcactctgtattt
tttaaaattctaagatactttgaaagatacaacttagacagtatatttgatgaaaagtca
aagcgaatgacaatcaaggcaatcctaaaaagtttaaatatagagaatgctgatgatgat
gagaatataggacaagttataaatgaaatttcctatgtaaaaaatgaacttatggataaa
aatgaatttaattcagaagtattaacaaaagatgagtttttaaaagtatacaacttatac
gaagaacaaaaatctaaagttaataaaatagattttgatgatatgcttataagaacttat
tatttacttttgaacaataagtctgcactagaaatggttagaaatgtgtataaatatata
ttgatagatgaatttcaagatataaataaagtacagtttgaagttttaaagttaatttgt
agcccattaaacaatatatttgcagttggagatgaggaccaaagtatatatggatttaga
ggtgctagaccagattttttgcttgaatttgaacaatactttaataatactaaaaaaata
atattagatataaattacaggtctaaaagtgagatagttcatactgcaaatagacttatt
gacaaaaataaaaatagatatgaaaaaatcattaagtgtagtcagggggatggaggaagt
gttacctatatttctccgcatgattcagaggaagaagccttatatattgccagggaaata
attgacgaaatacaaaaagattatgtagagtattcagattttgcagtaatttatagaact
aatatacagtcaagagcattagtagatgtatttatggatatgaggattccatttgtagta
aaagactcagtaattacaatatatgaccattgggcaagtcaagatatactagcctattta
agaataggtattaatccaaaatcaaataaagattggttgagaattataaacaagcctttt
agatatatatccaaagacagtataaatatggttaaggatgaaaaagactttataacagca
ttaataaataagtgtaatcttcatcctaaacaagttaaaacaataaatgatttggaaata
gatttaagttatttaaatactttaaatcctaaaaatgcaatatcttatattagaactagt
cttgattatgatagatatgttttagattattgtagcaacagaaagataaagactaatgga
cttgtagagatattaaatgaacttgagagttcagcaactaattttaatactgttacagag
tttttagagcatattgatagagtaaagactgagttaacggaaaataacaagaataagcag
actgagggtgtcatatttacaactatgcatagtgcaaaaggattagaatttagaaatgtt
tatattataggtgtaaatgaaggaacaatacctcatgaaaaatcatatgatatttgtaag
gaagagaaaaaagaagaacaattagaagaagaaagaagacttatgtatgttgctattaca
agagctgaagaaaagttatgtataagctctactttaaataagtatggtaagaaagttgat
aaatcattatttattaatgatataaaatctccaacgaaaaaagaaattgacagtattgat
gtaggggataaggtataccataaaaaatttcatgaaggagaaataattaaaaaagatgga
attatgtttacaataaagtttaaagatagagagcgaatcttggatttgaaaacttgttta
ttgaagaatataatttatactatttaa
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