Clostridioides difficile 630: CD630_08310
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Entry
CD630_08310 CDS
T00487
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD630_08310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdf03019
]
CD630_08310
03009 Ribosome biogenesis [BR:
cdf03009
]
CD630_08310
Enzymes [BR:
cdf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CD630_08310
Messenger RNA biogenesis [BR:
cdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CD630_08310
Ribosome biogenesis [BR:
cdf03009
]
Prokaryotic type
rRNA helicases
CD630_08310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SecA_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAJ67665
UniProt:
Q18A25
LinkDB
All DBs
Position
complement(1006531..1007640)
Genome browser
AA seq
369 aa
AA seq
DB search
MDFKSLGISENTINILKKSGITTPTPIQKESIKLIKEGKDVIAEAQTGTGKTLAFLLPIF
ENISLDINDIQVLILSPTRELAIQITEEAMKLKESKDVSILAAYGGKDIGSQIKKLKGNI
HMIIATPGRLLDHLNRKTIDLSKLKTFVLDEADQMLLMGFKNEVEAILKETSNKKQTLCF
SATINSQVKKLAYRYTKNPVVVSIQKEEITLNNIKQEVVETTDRKKLDALCKVLDEDNPF
MAIIFCRTKRRVDNLEEALAIRGYNCQKLHSDIAQSKRERIMKSFRNLDIQYLIATDVAS
RGLDISGVSHIYNYDLPETPEDYIHRIGRTGRAGEEGYTCAFIDPKNERMLSEIETAIES
KISRRIIEL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaaagcttagggattagtgaaaatacaataaatattctaaaaaaatcagga
ataacaacacctacacctatacaaaaagaaagtattaaactaataaaagaaggaaaagat
gtaatagcagaagctcaaactggaacaggaaaaacactagcttttttacttccgatattt
gaaaatatatcattagatataaatgatatacaagtacttatactttctcctacaagagaa
ctagctattcaaataacagaagaagctatgaaacttaaagaatctaaagatgtaagtatt
cttgcagcatatggaggaaaagatattggttctcaaataaagaaactaaaaggaaatatt
catatgattatagctacaccaggtaggcttttagaccatctaaatagaaaaacaatagac
cttagtaagttgaagacttttgttttagatgaagcagaccaaatgttgcttatgggattt
aaaaatgaagtggaagctattttaaaagagacttcaaacaaaaagcaaacactatgcttt
tctgcaactataaattctcaagtaaaaaaattagcttatagatacacaaaaaatcctgtt
gtagtttctattcaaaaagaagaaatcactcttaataatataaaacaagaagtagtagaa
actacagatagaaaaaaattagatgccttatgtaaggtactagatgaagataatcctttt
atggcaataatattttgtagaactaagagaagggttgacaatcttgaagaagctcttgct
ataagaggatataattgtcaaaaacttcatagtgatattgctcaatcaaaacgagaaaga
ataatgaaatcatttagaaatttagatatacaatacttaatagctacagatgtagcttct
cgtggtcttgatatatctggagtaagtcatatatataattacgatttaccagaaacacca
gaagactacatccaccgtattggtagaactggtagagctggtgaagaaggatatacatgt
gcttttattgaccctaaaaatgaacgaatgttaagtgaaatagagacggctatagaatct
aaaattagtagaagaattatagaattataa
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