Clostridioides difficile 630: CD630_10420
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Entry
CD630_10420 CDS
T00487
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdf03400
]
CD630_10420 (sbcD)
DNA repair and recombination proteins [BR:
cdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD630_10420 (sbcD)
Archaeal homologous recombinant proteins
CD630_10420 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CAJ67883
UniProt:
Q18AP4
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All DBs
Position
1231739..1232950
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AA seq
403 aa
AA seq
DB search
MRFIHTSDWHLGKSLEGHSRIEEQAKFCEEFIKIVESNEIDMVIIAGDVYDTSNPPAQAE
KLFYQTVSRLANNGQRCVLIISGNHDNPERLSAITPLAHEQGILIYGYPLSATIEAKYKG
FEITYATQGCTKLNINGENIVVATLPYPSEKRLNEVFSSEDEFEKQKNYSEKVGDIFRSL
EENFRSDTINIAVSHIFVIGGESTESERPIQLGGSFLVERKDLPEKAQYTALGHLHKQQK
ASERLNAYYSGSPLQYSKDERAYTKGAYIVDIKAGEKPIIEDVYFNNYKPIEVFKCNGIE
EALDICEQNQDREIWSYFEINTDEIISQNEIKKMKELLKDIIEIKPIITSCYEQESVDIK
EKSMAELFREFYSFSKGVEPKGELMDLFLDIISEEGESADETN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagatttattcatacatcagattggcatctagggaagtccctagaaggccattctaga
attgaggaacaagcaaagttttgtgaggaatttataaaaatagtagaatcaaatgaaata
gatatggttataattgctggagatgtatatgatacttctaatcccccagcacaagcagaa
aaactattttatcagactgtatcaagacttgccaataatggtcagaggtgtgtattaata
atttcaggaaatcatgataatccagagagactctctgcaataacacctctagcacatgaa
caggggatacttatatatggttatccattaagtgctacgatagaagctaagtataaaggg
tttgaaataacatatgcaactcagggatgtacaaaactgaatataaatggagaaaatatt
gtggttgctacattaccttatccaagtgaaaaaagattaaatgaagttttttcaagtgaa
gatgagtttgagaaacaaaaaaattattctgaaaaggtaggagatatatttagaagttta
gaagaaaattttagaagtgatactataaatatagccgtatcacatatatttgtaataggt
ggagagagtactgaatcagaaagacctatacaattaggtggaagttttttagttgaaaga
aaagatttgccagaaaaggctcaatatactgcactaggtcatttacataaacaacaaaaa
gcttccgaacgtttaaatgcatactattctggttctccacttcaatatagcaaggatgaa
agagcgtataccaaaggggcatacatagtggatataaaagctggtgaaaaaccaataatt
gaagatgtatattttaataattacaaacctatagaagtatttaaatgtaatggaatagaa
gaagcactagatatatgtgagcaaaatcaagatagagagatttggtcatattttgaaata
aatactgatgagataatatcacagaatgaaattaaaaaaatgaaggaactattaaaagac
ataatagaaataaaaccaataataacatcttgttatgaacaagaaagtgtagatataaaa
gaaaagtctatggcagagttgtttagagagttctattcttttagtaaaggtgtagagcca
aaaggagaacttatggatttatttctagatataataagtgaagaaggtgaatcagcagat
gagaccaattag
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