Clostridioides difficile 630: CD630_10430
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Entry
CD630_10430 CDS
T00487
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdf03400
]
CD630_10430 (sbcC)
DNA repair and recombination proteins [BR:
cdf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD630_10430 (sbcC)
Archaeal homologous recombinant proteins
CD630_10430 (sbcC)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAJ67884
UniProt:
Q18AP3
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All DBs
Position
1232937..1236464
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AA seq
1175 aa
AA seq
DB search
MRPIRLELTGLNSYIDKQVIDFEKLIERGLFGIFGTTGSGKSTILDAITIAMYGNISRNT
KEYINSVCDKAIISYEFEIGSKNTRRRYIVDRTIARSKTGTKTSNARLIEVLNDNTQNVL
ADKVVEVNEKVAQVVGLTANDFTRSVVLPQDKFNEFLRLSRADRRDMLERIFNLEKYGRS
LGEKVKKRKNIQLQNLKDLKSKLSQYDGITEEVYNNINQELIELKNLEKDKNNALDLAQK
SYEESKTVYEEQLKLEKNELRKNELDLKNSEIKEKIALVENDSNAKKVDPYISSVQNLEK
KIDEDSFAVSNLEKKLAILNQELEVTKNRYEKINKIKNEEVPKLSEEKIRLQQAIKLEEE
LVLLDRELKELKESGINLNKTKVELEKVKQVSESRKDAVTKSIKEVEGKIDKVNISAELK
QKIFLAYEYEKDYNNVLEEKNQKLNKLEEILKETENINLKVRYIDKDKNDVNRNLENLSL
HLDVLLKKCPGKSADLLLKSEYVTELRNKANNTKENEIKKSSIQDELKIILESKFNTERE
VNLLNEKLENNRKNRDDLEKELEELKYLNLASELRRELKENMPCPVCGSKHHENHDITKY
DENISFVKEKLEKLEKEKISIRNNIEELNAKVSGYLSIEKMKTKELEDVKGKLGEIPSSQ
LLKKLDEEQRKLALLKSNIQEWEKEKESTENKVTLAKEEKNKIEKEELKIRESLNNYKKL
TRDLNIEIEGLENKCKKIKQEYLGLKTITKVSNLLSKVKEIRENEKELELLSTGHSNLLK
NRDSLDIKIRENESKLHEIEIELIKARELYVEKKLSRDNKYKEVISITKGDLAKNLLHNV
EENICKILEQEESSKKKLEEQRLEYEKNIAEKHNIDGRLKTAKEQYKDQKSTLNKLLAEN
KFESIYAVKRALLDTDAVKKLIEEILEHEEEQKLLSFKIKSSKEKLNGRSIKKEYFEQLK
DEIYNLKVEIGNISKDIGANQNQLITLKDSLDKINDFNKQLKVVEHNVDLLEELDKCVQG
NKFVEYVSTNQLKYIALEASKRLDGITKGRYALEIDSTLNFVMRDNFNGGERRSIDTLSG
GETFLTSLSLALALSSQIQLKGSAPLEFFFLDEGFGSLDSELLEIVIESLERLHSNNLSV
GIISHVEELKNRVPVKLLVSSSEAGIGSKVKIEYS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattagattagaacttacagggcttaatagctatattgataaacaagttata
gactttgaaaaattaattgaaagaggtttgtttgggatatttggaactactggaagtgga
aaatctacaatcttagatgcaataactattgctatgtatggaaatatatccagaaataca
aaagaatatataaacagtgtgtgcgataaggcaattatatcatacgagtttgagatagga
agcaaaaacactagaagaagatacattgtagatagaaccattgctagaagcaaaacagga
acaaagacctctaatgctagattaatagaagtattgaatgacaatacccaaaatgtttta
gctgataaagttgtggaagtaaatgaaaaagtagcgcaggtcgtaggattaacggcaaat
gattttactaggtcagtagttttaccacaagacaaatttaatgagtttctaagattatca
cgtgcagatagaagagacatgttagagagaatttttaatcttgagaaatatggaagaagt
cttggcgaaaaagtgaaaaagagaaaaaatatacagttacaaaatttaaaagatttgaaa
tcaaaattaagtcaatatgatggaattacagaggaagtatataacaatataaaccaagaa
ttaatagagttaaaaaatttggaaaaagataagaataatgctttagacctagctcaaaaa
tcttatgaagaaagtaaaacagtatatgaagaacaattaaagttagaaaaaaatgaactt
agaaaaaatgagcttgatttaaaaaatagtgagataaaagaaaagattgctcttgtagaa
aatgatagtaacgctaaaaaggtagacccatacataagttcagttcaaaatctagaaaaa
aagatagatgaagatagcttcgcagtaagtaatttagaaaagaaattagcaatattaaat
caggagcttgaagttacaaaaaatagatatgaaaaaataaacaaaattaagaatgaagaa
gtccctaaattgagtgaagaaaaaataagattgcaacaagcaataaaattagaagaagag
ttagttttattagatagagagttaaaagagctaaaagaaagtggaattaatttaaataag
actaaagttgaattagaaaaagtaaagcaggtgtcagagtccagaaaagatgcagttact
aaatctataaaagaagttgaaggaaagattgataaagtaaatataagtgcagaattaaaa
caaaaaatatttctagcatatgaatacgagaaagattacaacaacgtattggaagaaaaa
aatcaaaagctaaataaactagaagaaatactcaaagagacagaaaatataaatttaaaa
gttagatatattgataaagataagaatgatgtaaatcgtaatttagaaaatttatcactt
cacttggatgttcttcttaaaaaatgtcctggtaagagtgctgatttacttttaaaatct
gaatatgttactgaattaagaaataaagcaaataatactaaagaaaatgaaattaagaaa
agcagtatacaagatgaattaaagataatacttgaaagtaagtttaatactgaaagggaa
gtaaatttactaaatgaaaaacttgaaaataatagaaagaacagagatgacttagaaaaa
gaattagaagaactaaagtatttaaatttagcctctgaacttagacgtgaattaaaagaa
aatatgccttgtccagtttgtgggtcaaaacatcatgaaaatcatgatataactaagtat
gatgaaaatatatcttttgtcaaagaaaaactggagaaattagaaaaagaaaaaataagt
ataagaaacaatatagaggaattaaatgctaaagtaagtgggtatttatctatagaaaaa
atgaagactaaagaacttgaagatgtaaaaggaaaactaggggagattccatctagtcaa
ttattaaaaaaacttgatgaagaacaaagaaaacttgcattgttaaaatctaatattcag
gagtgggagaaagaaaaagagagtactgaaaataaagtaacattagctaaagaagaaaaa
aataaaattgaaaaagaagaattaaaaataagagagagtctgaataattataagaaatta
acaagagatttaaacatagaaatagaaggtttagaaaataaatgtaaaaaaattaaacag
gaatacctaggattaaagacgattactaaagtctctaatctattgtcaaaagtaaaagaa
ataagggagaatgaaaaagaattagaattactaagtactgggcattcaaatttattaaaa
aatagagactcactagatattaaaataagagaaaatgagagtaaactacatgaaatagag
atagaattaataaaggctagagaattatatgtagaaaagaaattgagtagagataataag
tataaagaagttattagcataacgaaaggtgatttagctaaaaatcttttacataatgtt
gaagaaaatatatgtaagatattagaacaagaagaatcaagtaagaaaaaattggaagag
caaagattagaatatgaaaaaaacattgctgaaaagcacaatatagatggtagacttaaa
actgctaaggaacaatataaagaccaaaaatcaacactaaataaactattggcagaaaat
aaatttgaaagtatatatgcagtaaaaagagctttattagatactgatgcagtaaaaaaa
ttgattgaagaaatactagagcatgaagaagaacaaaagttattatcatttaaaataaaa
tcatcaaaagaaaaattaaatggaagaagcataaagaaggagtactttgaacagttaaaa
gatgaaatttataatttgaaagtagaaataggaaatatatccaaagatattggagctaat
caaaatcagttaataacattaaaagactctttagataagataaatgattttaataaacaa
cttaaggtagttgaacacaatgtggacttattggaagaattagataaatgtgtacaagga
aataaatttgtagaatatgtttctacaaaccaattaaaatatatagcgttggaagcatca
aaacgattggatggaataacaaaaggaagatatgcacttgaaattgactcaacactaaac
tttgtaatgagagataactttaatggaggagaaagaagaagcattgatactctatctggt
ggagagacattcttgacatctctatcattagcacttgctctttcatctcaaatacaatta
aagggaagtgcaccattagaatttttctttttagatgaaggttttggttcattagatagt
gaacttttagaaattgttatagaatccttggaaagattgcatagtaataatctaagtgtg
ggtataataagtcatgtcgaggaacttaaaaatagagttcctgttaagctattagtttca
tctagtgaggctggaataggttcaaaagtaaaaattgaatatagttag
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