Clostridioides difficile 630: CD630_11280
Help
Entry
CD630_11280 CDS
T00487
Symbol
polA
Name
(GenBank) DNA polymerase I (POLI)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf03030
DNA replication
cdf03410
Base excision repair
cdf03420
Nucleotide excision repair
cdf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CD630_11280 (polA)
03410 Base excision repair
CD630_11280 (polA)
03420 Nucleotide excision repair
CD630_11280 (polA)
03440 Homologous recombination
CD630_11280 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdf03032
]
CD630_11280 (polA)
03400 DNA repair and recombination proteins [BR:
cdf03400
]
CD630_11280 (polA)
Enzymes [BR:
cdf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CD630_11280 (polA)
DNA replication proteins [BR:
cdf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CD630_11280 (polA)
DNA repair and recombination proteins [BR:
cdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CD630_11280 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD630_11280 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
XPG_I
HHH_2
DUF5069
Motif
Other DBs
NCBI-ProteinID:
CAJ67980
UniProt:
Q18AY7
LinkDB
All DBs
Position
1326574..1329222
Genome browser
AA seq
882 aa
AA seq
DB search
MEKKLIIIDGNSIINRAFYALPEMNNKEGLKTNAIYGFTTMLFKMIDIYKPTHISVAFDR
KAPTFRHLEYKEYKAGRKGMPDELAEQLQPLKDLLDKFRINRLEIDGYEADDIIGTVSKK
AEENGYKVYIVTGDKDAIQLASDNTTTLITKKGVGEVEEYNFNSVIEKYEMTPTQFIDLK
GLMGDKSDNIPGVPGIGEKTGIKLIKEFSSIENLIENTDKLKGSVKKKIEENKEIAIQSK
RLATIIRDVPIEVDLDSMIFGDYDKDELLDKFRYFGFTSLLSRLVDLVDSDDTEHVEEKI
EILKLKDIEKFIDEVNKKGQVILKTVRGQGNILEKNIIYIFISVDGEKIYYVDSNEVSKL
DSIFSNNEIKKYGYNLKDDYISLKPYNINLENMYFDITIAEYLIDSTSSTSYDCSAIAMK
YLSKKVKSKEELLGKGVKSKNYEDLEFEDLAEYMGQIICTVKETVPMMERSLMDMSMDGL
FYHVEMPLVEVLGHMEYEGIKVDKSILDELSVEFKEIIATLEKEIYELSGEPFNINSPKQ
LGVILFEKLELPIIKKTKTGYSTNADVLEKLRDKHPIIDKITEYRQIVKLNSTYVEGLLN
IINPESNRIHSSFNQTITTTGRISSTEPNLQNIPIKMEMGRKIRKVFIADDNCKLVDADY
SQVELRVLAHMSQDENMIEAFKHHEDIHTKTASQVFNVPMEDVTSELRGAAKAVNFGIIY
GKSDFGLADDLNIPVPKAKEYIESYFAKYHKIKEFMDTTVEKASEDGYAVTILNRRRYIP
EIKSSNFMERNRGKRFAMNAPIQGSAADIIKIAMINVHKKLEENNLKSKLILQVHDELIV
EAIDDEIDIVKKIVKEEMENAVNMDVHLDVDLNVGSSWYETK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaattaattataatagatggaaattcaataataaatagagctttttatgct
cttccagaaatgaataataaagaagggctaaagaccaatgcaatatatggatttacaaca
atgctatttaaaatgatagatatatataaaccaacacatataagtgtagcatttgacaga
aaagcacctacatttagacatttagaatataaagagtataaggctggaagaaagggaatg
ccagatgaactggcagaacaattacagccattaaaagaccttttagataaatttagaata
aatagattggaaatagatggctatgaggcagatgatattataggtactgtttctaaaaaa
gcagaagaaaatggatataaggtatacatagtaactggagacaaagatgctattcaactt
gcttcagacaatacaactactcttataacaaaaaaaggagttggagaagttgaagaatac
aactttaattctgtaattgaaaaatacgagatgactccaacacaatttatcgatttaaag
ggtcttatgggagacaagtctgataatatacctggagtacctggaataggtgaaaaaaca
ggtataaagcttataaaagagttttctagtatagagaatctaatagagaatacagataag
cttaaaggtagtgtaaaaaagaaaatagaggaaaacaaagaaatagctattcaaagtaaa
agacttgcaacaattataagagatgtgccaatagaagtggatttagatagtatgattttt
ggcgattatgataaagatgaacttttagataaatttagatactttggatttacaagtctc
ttatcaagattagttgatttggtcgattcagatgacacagaacacgtagaagaaaaaata
gaaatattaaaattaaaagatatagaaaaatttatagatgaagtaaacaaaaaaggacaa
gttattttaaaaactgttagaggacaaggtaatatacttgaaaaaaatataatatatatt
tttataagtgtagatggagaaaaaatatattatgtagattcaaatgaagtgtcaaagtta
gatagtatattttcaaataatgaaattaaaaagtatggatataatttaaaagatgattat
atatctttaaaaccatataatataaacttagaaaatatgtattttgatataacaatagct
gagtacttaatagattcaacttcatctacctcatatgattgtagtgcaatagctatgaag
tatttatcaaaaaaggttaaatcaaaagaagaattattaggaaagggtgttaaatctaaa
aactatgaggatttagaatttgaggatttagcagagtatatgggtcaaataatatgcaca
gttaaagaaacagttcctatgatggaaagaagtctaatggatatgagtatggatggtctt
ttttatcatgtagagatgcctttagtagaagtcttaggtcatatggagtatgaaggtata
aaagtagacaaaagtatattggatgaattgagtgttgaatttaaagaaataatagctaca
ttagaaaaggaaatttatgaattatcaggagagccattcaatataaattcaccaaaacaa
ttgggtgttatattatttgaaaaattagagcttccaataattaaaaaaactaaaactgga
tattcaactaatgcagatgttttagaaaaattaagagataagcatccaataatagataag
ataactgagtatagacaaatagtaaagttaaattctacttacgttgaaggacttttaaat
ataataaatccagaaagtaatagaatacattcatcatttaatcaaactataacgactaca
ggaagaatttcatctacagaaccaaatcttcaaaatatacctataaaaatggaaatgggt
agaaaaataagaaaagtgtttattgcagatgataactgtaagttggttgatgccgattac
tcacaagtagagctaagagttcttgcacatatgagtcaggatgaaaatatgatagaagca
tttaaacatcatgaagatattcataccaaaacagcttcacaagtttttaatgttcctatg
gaagatgttactagtgaattgagaggtgcagctaaagctgtaaactttggtattatatat
ggtaaaagtgactttggtctagctgatgatttaaatatacctgttccaaaggcgaaagaa
tatatcgaaagttattttgctaaataccataaaataaaagagtttatggacacaacagta
gaaaaggctagtgaggatggatatgctgtaacaattttaaacagaagaagatatatacca
gaaataaagtcaagcaattttatggaaagaaatagaggaaagagatttgcaatgaatgca
ccaatacaaggaagtgcagcagatataataaaaattgctatgataaatgttcataaaaaa
ttggaagagaacaatttgaaatcaaaacttatactacaagttcacgacgagttgatagtt
gaagcaattgatgatgaaatagatatagttaagaaaatagtaaaagaagaaatggaaaat
gctgtaaatatggatgttcacttagatgtagatttaaatgtaggtagttcttggtatgag
acaaagtag
DBGET
integrated database retrieval system
