Clostridioides difficile 630: CD630_12080
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Entry
CD630_12080 CDS
T00487
Name
(GenBank) putative RNA-binding S4-domain protein
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdf03009
]
CD630_12080
Enzymes [BR:
cdf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
CD630_12080
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
CD630_12080
Ribosome biogenesis [BR:
cdf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CD630_12080
23S rRNA modification factors
CD630_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
S4_2
Beta-sand_ComC_1st
Motif
Other DBs
NCBI-ProteinID:
CAJ68062
UniProt:
Q18B73
LinkDB
All DBs
Position
1406560..1407372
Genome browser
AA seq
270 aa
AA seq
DB search
MKKRIDLLLVEQGYFESRERAKKAIMAGLVFVDNQRCDKAGTEVKEDCSIEVKGNPIPYV
SRGGLKLEKAMKNFDLTIDGKVCMDIGASTGGFTDCMLKNGAIKVFSIDVGYGQLAWKLR
QDDRVVCMERTNIRNVTIEDTKQFADFASIDVSFISLKLVLPKAKELVRHDGEVVALIKP
QFEAGREKVGKKGVVREKSTHIEVIKMISDFSVENGFEILGLDFSPIKGPEGNIEYLIHL
RNGNEGYEFDGETYNNKIVEVVEASHNLDK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaatagatttattattagtagaacaagggtactttgaaagtagagaaaga
gccaaaaaagcaataatggctggattggtttttgttgataatcaaaggtgtgataaggct
ggtacagaagtaaaagaagattgtagtatagaagtaaaaggaaatccaataccatatgtc
agtagaggtggtttaaagcttgaaaaagcaatgaaaaactttgatttgactattgatgga
aaggtatgtatggatataggggcatccacaggtggttttacagattgtatgctcaaaaat
ggagcaataaaagtattttctatagatgttggttatggtcaacttgcatggaaattgaga
caagatgatagggttgtgtgtatggaaagaaccaatataagaaatgtgacaatagaagat
acaaagcagtttgctgattttgcgtcaattgatgtgtcttttatatcgttaaagttagta
cttccaaaggcaaaggagttagtacgtcatgatggggaagttgtcgctttaattaaacct
caatttgaagcaggaagagaaaaagtaggtaaaaaaggagtagttagagaaaaatctaca
catatagaagttataaaaatgatttctgatttttcagtcgaaaatggatttgagatttta
gggttagatttttctcctattaaaggtcctgaaggtaatatagaatatctaattcatttg
agaaatggaaatgaaggatatgaatttgatggtgagacatacaataacaaaatagtagaa
gttgttgaagcttctcataatttagacaaatag
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