Clostridioides difficile 630: CD630_13110
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Entry
CD630_13110 CDS
T00487
Name
(GenBank) putative rna-binding protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf00920
Sulfur metabolism
cdf01100
Metabolic pathways
cdf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
CD630_13110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdf03400
]
CD630_13110
Enzymes [BR:
cdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
CD630_13110
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
CD630_13110
DNA repair and recombination proteins [BR:
cdf03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
CD630_13110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAJ68092
UniProt:
W8W0T8
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All DBs
Position
join(1520876..1521544,1523462..1523734)
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AA seq
313 aa
AA seq
DB search
MMNNMDSIINYIYEGDYFIVTSHISPDGDNIGSTLSMYYTLKNLGKNVYYVLDDEAPLNL
RFLVEGVKIYKSNEFNMKNYSLIALDCGDKMRICVSDEIKNNASKLICIDHHASNDSYGD
LNYVDIDASSTCELVYNLLVRFQQIKDINIINEDIATCLYTGLVTDTGNFSYSNVHASSF
EMAKNLLVLGAQKNTIIQNIYQSNSSGYYKLLGEALKGLEIFDMMNRNNISFNDVDGITT
YTRDIKGIEVGILFKEKKQNEIKVSFRSKNYVDVSEIAKLFGGGGHVRAAGCTIRDSIDN
AKKMVLEAVLKSI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataatatggatagtattataaactatatttatgagggtgactattttatagtt
acctctcatatcagtccagatggagacaatattggttctacactttcaatgtattataca
ttgaagaatttaggaaaaaatgtatattatgtacttgatgatgaagctccattaaattta
aggtttttggttgaaggtgtaaaaatctataagtctaatgaatttaatatgaagaactat
tctctaattgcacttgattgtggagataagatgagaatatgtgtgagtgatgaaatcaaa
aataatgcatcaaaattaatctgtattgaccatcatgctagtaatgattcatatggagat
ttaaattatgtagatattgatgcatcttctacatgtgaattagtttataatttattagtt
agatttcagcaaataaaagatattaatattataaatgaagatatagcaacatgtttatat
acaggtcttgtaactgatactggaaacttttcgtattcaaatgtacatgcaagtagcttt
gaaatggcaaaaaatttacttgttttaggtgcacaaaaaaatactataatacaaaatata
tatcaaagcaattcttctggttattacaaattattaggagaagctctaaagggtttggag
atatttgatatgatgaatagaaataatattagctttaatgatgttgatggaataacaaca
tatacaagagacataaaaggtatagaagttggaattttatttaaagagaaaaaacaaaat
gaaattaaagtgagttttaggtcaaaaaattatgttgatgtaagtgaaatagccaagtta
tttggtggtggtggtcatgtaagggctgctggatgtactattagagatagtattgataat
gcaaagaaaatggtactagaggcagtgttaaaatcaatttaa
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