Clostridioides difficile 630: CD630_14980
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Entry
CD630_14980 CDS
T00487
Symbol
sigA2
Name
(GenBank) RNA polymerase sigma factor SigA2 (sigma-43)
KO
K03086
RNA polymerase primary sigma factor
Organism
cdf
Clostridioides difficile 630
Pathway
cdf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CD630_14980 (sigA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdf03021
]
CD630_14980 (sigA2)
Transcription machinery [BR:
cdf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CD630_14980 (sigA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CAJ68363
UniProt:
Q18C16
LinkDB
All DBs
Position
1734991..1735881
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AA seq
296 aa
AA seq
DB search
MIMDTKKENNYENYICVGSSNVSNAMKMYLKEIEEYKMLSAGEEVELAKEIINSSSVAKE
KFINSNYRLVVSIAKRYKRDSIDMLDLIQAGNIGLIKAVEKYDYKKGYKFSTYATWWIKQ
SITRYIDDCENTIRIPIHLHQRINFVKKKKQELLNVLLREPTIDEIADACGLEVDKVLEL
LRRDKNVVSLDTPLKEDEDSSLVEFIPSDADFKDVVIHEVEQHNLKEKIEELLTGLGEQE
QQVLRMRFGIDDDDPKTLEQIGKVFGVTRERIRQIEAKAIRKLRHPSKLKQLKHFY
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgattatggatactaaaaaagaaaataattatgaaaattatatttgtgtgggttcatca
aatgtatcaaatgcgatgaaaatgtatttaaaggaaatagaggaatacaaaatgttgtca
gcaggagaagaggtagagctggctaaggaaataatcaactcatcttcagtagcaaaagaa
aaatttataaattcaaattataggttggtagtgagcatagcaaagagatataaaagagat
agtattgatatgttggatttaattcaagcaggaaatataggacttataaaagctgtagaa
aagtacgattataaaaaaggatacaaatttagcacttatgcaacttggtggataaaacaa
agtataacaagatatatcgacgattgcgaaaatactattaggatacctatacatcttcat
cagagaataaattttgtaaagaaaaagaaacaagaacttttaaatgtattattaagagag
ccaactatagatgagattgcagatgcatgtggtttagaagttgacaaagtgttggaatta
ttaagaagagataaaaatgttgtatctttggatactccattaaaagaagatgaggatagt
agtttagttgaatttataccatcagatgctgattttaaagatgttgtaatacacgaagtt
gaacagcataatttaaaagaaaagatagaagaactacttacaggtcttggagagcaagaa
cagcaagttttaagaatgagatttggaattgatgatgatgaccctaaaacactagaacag
attggaaaggtatttggagttaccagagaacgaataagacagatagaagctaaagcaata
agaaaattaagacatccaagtaagttaaaacaattaaagcatttttattaa
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