Clostridioides difficile 630: CD630_18080
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Entry
CD630_18080 CDS
T00487
Name
(GenBank) Pyridoxal-dependent decarboxylase, group IV decarboxylase family
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf00300
Lysine biosynthesis
cdf00470
D-Amino acid metabolism
cdf01100
Metabolic pathways
cdf01110
Biosynthesis of secondary metabolites
cdf01120
Microbial metabolism in diverse environments
cdf01230
Biosynthesis of amino acids
Module
cdf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD630_18080
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD630_18080
Enzymes [BR:
cdf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CD630_18080
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAJ68678
UniProt:
Q187B7
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Position
2091249..2092460
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AA seq
403 aa
AA seq
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MYSNEDYKFIEENAPCYIYDETNIIEKCKELKNNILGFDFLYSIKTNPYNKIVKSIAEQG
FGADASSTNEVMISSKCGVSKDDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKIS
KKHNQKVKIGIRINPDFTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKS
QVLDFEKLGHYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLT
QKIAFTNSNTLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPII
SNLIENITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLK
KANIGDLISISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtactcaaatgaagactataaatttatagaagaaaatgcaccatgttatatatatgat
gagactaatataattgaaaaatgtaaggaattgaaaaataatattttaggttttgatttt
ttatattctataaaaacaaatccatataacaaaattgtaaaaagcattgcagagcaaggt
tttggagcagatgcttcttcaactaatgaagttatgatttcatcaaaatgtggagtttct
aaagatgatatttattattcatcaccaggcaaaacagagattgatatagaaactgtttta
gataaatgcataattattgcagatagtattacagaaatagaacttataaataagatatct
aaaaagcataatcagaaagttaaaataggaataagaataaatcctgattttactatggat
gatgatagtgctaaatcaagcaaatttggtatagatatagaagatatgagcagtgttttt
aagatgttaagtatgtgtgattatgtatctgtagttggtattcatatacatattaaatct
caggtattggattttgaaaagttaggacattattatgaaaaatgtttttttatagcttta
aatttaaataaaagtaagtatattaatattgaatttataaattttggtagtggacttgga
gtagcttatgataatcttagagaaaatccacttaatcttaaagagctttcaaaattaact
caaaagattgcttttactaattcaaacacactaaaatcaagacttcttattgaatcagga
cgtttcatagtttgtaaatcaggtaattattatgttaaaattgtagatattaaagtatca
agagggaaaaaatatcttattgtaaaaaatggacttaatggatttatgagacctattatt
tctaatttaattgaaaatattacttgtggagtagaattagaaggtcaagagccattatat
acatcaaatcatgccttttctctttcagtattaaataatttaaaagaagaagagtatgta
aatgttgttgggaatctctgtacatcattagatgtaattgcaaataatgttaaattgaaa
aaagcaaacataggagatttgatttcaattagtaatgctggaagttactcctattcttta
tcaccgctattattttcaagttatgaatttcctaaacaatattataaaagaaaagatgga
tatattgagtaa
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