Clostridioides difficile 630: CD630_25390
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Entry
CD630_25390 CDS
T00487
Symbol
rnz
Name
(GenBank) Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease)
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdf03016
]
CD630_25390 (rnz)
Enzymes [BR:
cdf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CD630_25390 (rnz)
Transfer RNA biogenesis [BR:
cdf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CD630_25390 (rnz)
Prokaryotic type
CD630_25390 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_3
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
CAJ69426
UniProt:
Q182M7
LinkDB
All DBs
Position
2934488..2935405
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AA seq
305 aa
AA seq
DB search
MIDLTLLGCGGNVPMPNRFLSSVFINYKGRKILIDCGEGTQVSMKLKKCGFKDIDLICIT
HLHGDHIFGLLGLLSTIGNSGRTSDLTIVGPVGIVDCIRSMRNLVEYVPYTLKIIENPQG
NFSLDNKVLRNLEISTISLEHSIECLGYSFNFRRNPKFDIDKATKNEVPKILWNKLQEGQ
NIVLDSKQYTPDMVLGELRKGVKISLTTDTRPIESIPDFIKDSDLFICEAMYGDDLDISK
AVRNKHMTFREAANLAKLGNVKQLLLTHFSPSLDIPSMYLENATNVFENTILGEDRLSLR
LNFDE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatagatttaactttacttggatgtggtggaaatgtacctatgccaaacagatttcta
tcctctgtatttataaactataaaggtagaaaaatactaattgactgtggtgaaggtact
caggtatctatgaagctaaaaaaatgtggctttaaagatatagacttgatttgtataacc
catttacatggtgaccatatatttggacttttaggacttttatcaacaattgggaatagt
ggtcgtacaagtgatttaactatagttggtccagttggaatagtcgattgtatacgttct
atgagaaatttagtagaatatgtaccatacactttaaaaattatagaaaaccctcaaggc
aatttttctttagataataaagttttaagaaatttagaaatttcaacaatcagtttagaa
cactctatagagtgtttaggatacagttttaattttagaagaaaccctaaatttgatata
gataaggcaactaaaaacgaagttcctaaaatattatggaacaaactccaagaaggtcaa
aatatagttttagattcaaaacaatacactccagatatggtcttaggagaattgagaaag
ggagttaagataagtcttacaaccgatacaagacctatagaatcaataccagatttcata
aaagatagtgatttatttatatgtgaagccatgtatggtgatgatttagatatatcaaaa
gctgttagaaacaaacatatgacttttagagaagctgctaatcttgcaaaacttggaaat
gtcaaacaacttttactgactcattttagtccttctttagacatacctagtatgtattta
gaaaatgctactaatgtttttgaaaatactattcttggagaagatagattaagcttgcgt
ttaaattttgatgaataa
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