Clostridioides difficile 630: CD630_25900
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Entry
CD630_25900 CDS
T00487
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase (DAP epimerase)
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf00300
Lysine biosynthesis
cdf00470
D-Amino acid metabolism
cdf01100
Metabolic pathways
cdf01110
Biosynthesis of secondary metabolites
cdf01120
Microbial metabolism in diverse environments
cdf01230
Biosynthesis of amino acids
Module
cdf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD630_25900 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD630_25900 (dapF)
Enzymes [BR:
cdf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CD630_25900 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CAJ69480
UniProt:
Q182T1
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All DBs
Position
complement(2995705..2996535)
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AA seq
276 aa
AA seq
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MKFWKLHGIGNDFIAIDGRFDQINPSDYTALAKKVCHRRFSVGADGLLVVKDSKVADVEM
VYYNSDGSRAAMCGNGLRCFCKFVYDNCIVKKESFTVDTLDGIKDIKINLTNREINSIRV
NMGKGSFIAKDVPVLTNKERFVQESIKVLDRELKVTSMLMGVPHTVVIVDELDVDDVCKY
GKEIENNKIFPEKTNVNFVKVEDKYNIHVYTWERGCGYTLGCGTGMTASAIVCNLLNMVE
SSVNVTSQGGTVKIDVGDFSYMTGPAVKICEGILEV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttggaaactacatggaataggaaatgattttatagcaatagatggaagattc
gaccagataaatccatctgattatactgctttagcaaaaaaagtatgccatagaagattt
tctgtaggagcggatggattgttagttgtgaaagattcaaaagttgcagatgtagaaatg
gtatattataattctgatggttcaagagcagctatgtgtggaaatggccttagatgtttt
tgtaaatttgtttatgataattgtatagttaaaaaagaaagttttacagtagatacatta
gatggtataaaagatataaaaataaatcttaccaatagagaaataaactctataagagtc
aatatgggaaaaggaagttttatagctaaagacgttcctgtacttacaaataaagaacgt
tttgtgcaagaaagtataaaggttttagatagggagcttaaagttacttctatgttgatg
ggggttcctcatacagtagttatagtagatgaattagatgtagatgatgtttgtaaatat
ggaaaagagattgaaaataataaaatatttcctgaaaaaacgaatgtaaattttgtaaag
gtagaagataagtataatatacatgtttatacttgggaaagaggttgtggatatacttta
ggttgtggtactggtatgactgcatcagcaatagtgtgcaatttacttaatatggtagaa
agtagtgtaaatgtaacgtctcaaggtggaacagttaaaatagatgtaggagatttctct
tatatgacaggtccagcagtaaaaatatgtgaaggtattttggaggtttaa
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