Clostridioides difficile 630: CD630_26030
Help
Entry
CD630_26030 CDS
T00487
Symbol
cdtR
Name
(GenBank) Clostridium difficile binary toxin regulatory gene, LytTR family
KO
K07707
two-component system, LytTR family, response regulator AgrA
Organism
cdf
Clostridioides difficile 630
Pathway
cdf02020
Two-component system
cdf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CD630_26030 (cdtR)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD630_26030 (cdtR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cdf02022
]
CD630_26030 (cdtR)
Two-component system [BR:
cdf02022
]
LytTR family
AgrC-AgrA (exoprotein synthesis)
CD630_26030 (cdtR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LytTR
Response_reg
Motif
Other DBs
NCBI-ProteinID:
CAJ69493
UniProt:
Q182U3
LinkDB
All DBs
Position
3012145..3012891
Genome browser
AA seq
248 aa
AA seq
DB search
MDILIFDNDVCFGMKLKEKINNILIKEGFDNDVVRLYHNANLLLKELTEKNKVRIYFIVV
DAKYKISNELCDGLWIAQKIRESDYISPIIFLTNHIEMILGIFDYRLEVMDFILKHDMEI
AESKIKACIKIAHKRYIKEKNYRSNFFTIYSDFSLWKISFDEVIYFETSTIPHKIKLVTT
SRIFEFYKSLKSLPDLDACFIRVHKSFVVNKYHIVSLDLKKNNIKMSNGHICRISNTYRN
ILKNIIKT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggatatattaatctttgataatgatgtttgttttggaatgaaactaaaagaaaaaata
aataatattttaataaaagaaggttttgataatgatgttgtaagattatatcataatgca
aatttgttattaaaagagcttactgaaaaaaataaagtaagaatatattttatagttgta
gacgcaaaatataagataagtaatgaattatgtgatggattatggatagcacaaaaaatt
agagaatcagattatattagtccaatcatatttcttacaaatcatatagaaatgatttta
gggatcttcgattataggttagaagttatggactttatactaaaacatgatatggaaatt
gctgaaagtaaaataaaagcttgtattaaaattgctcacaaaagatacattaaagaaaaa
aattatcgctctaatttttttactatctattcagatttctcactatggaaaatttcattt
gatgaagttatatattttgaaacaagcactattccacataaaataaaattagtgactact
tctagaatatttgaattctataaaagtttaaagtctttaccagatttagatgcatgcttt
atccgtgtacataaatcttttgtagttaataaatatcatattgtttctctcgacctaaag
aaaaataatattaaaatgagtaatggccatatatgtcgtatatctaatacatatagaaat
attttaaagaatattattaaaacataa
DBGET
integrated database retrieval system
