Clostridioides difficile 630: CD630_28340
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Entry
CD630_28340 CDS
T00487
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase (Serine methylase) (SHMT)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf00260
Glycine, serine and threonine metabolism
cdf00460
Cyanoamino acid metabolism
cdf00630
Glyoxylate and dicarboxylate metabolism
cdf00670
One carbon pool by folate
cdf00680
Methane metabolism
cdf01100
Metabolic pathways
cdf01110
Biosynthesis of secondary metabolites
cdf01120
Microbial metabolism in diverse environments
cdf01200
Carbon metabolism
cdf01230
Biosynthesis of amino acids
cdf01240
Biosynthesis of cofactors
cdf04981
Folate transport and metabolism
Module
cdf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CD630_28340 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
CD630_28340 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CD630_28340 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CD630_28340 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CD630_28340 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CD630_28340 (glyA1)
Enzymes [BR:
cdf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CD630_28340 (glyA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
DUF6445
Motif
Other DBs
NCBI-ProteinID:
CAJ69722
UniProt:
Q183S3
LinkDB
All DBs
Position
complement(3311643..3312899)
Genome browser
AA seq
418 aa
AA seq
DB search
MLKTTKISDPELYKIVADELVRQEHNIEMIASESTAPTEVLELSGCVFTNKTEEGYPGAR
FQAGSEEADKLETLAIKRAKEVFGAEHVNVQPYSGSTANYCVYSSILKPNDTVLSMRLDQ
GGHLTHGSAVNFLHDIYKYEFYGVDPNTGRIDYDALEAKAKECRPKLIIAGASSYPRLID
YERISKVAKEVGAYFMVDMAHVAGLVAAKVIPSPVPYADFVSSSTTKTFCGPRSGIVLCK
AEHAKKLDKGVFPGTLGSIHLNTVAAKAFSLLYLSTDKFKKIMEQVVVNAQTLASELISH
GFSIVSGGTDNHIVMVDLRSKNLTGKQFEKALEYVGITVNKNVIPDDPQSPFVTSGVRIG
LTSISQRGLKEKEVIQIAGIMNKVAENIDNKEVLDECKAEAQELISKFPLYPEGYFED
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaacaacaaaaatttcagacccagagttatacaagattgtagctgatgagttg
gttagacaagaacacaatattgagatgatagcttctgaaagtacagcaccaacagaagta
cttgaattaagtggatgtgtatttacaaataaaacagaagaaggctatccaggggctcgt
tttcaagcaggttctgaagaagcagataaacttgaaaccctagcaataaaacgtgcaaaa
gaagtatttggagcagaacatgtaaacgtacaaccgtattcaggttctacagctaactat
tgtgtatattcatcaatattaaaaccaaatgacactgttttaagtatgcgtcttgaccaa
ggtggacacttgacacatggtagcgcagttaattttttacatgacatttataaatatgaa
ttttatggggtagacccaaatactggacgtatagattatgatgctcttgaagcaaaggca
aaagaatgtagaccaaaacttataattgcaggggcaagttcatatccaagattaatagat
tatgaaagaatatcaaaggttgcaaaagaagtaggagcttactttatggtagatatggca
catgttgcaggattagtcgcagcgaaagtaatacctagtcctgtaccttatgcagatttt
gtttcttcatctacgacaaagactttctgtggaccaagaagtggtattgtactttgtaaa
gcagaacatgcaaagaaactcgataaaggtgtttttccaggaacattagggtctatacat
cttaatacagttgcagcaaaagccttttcactattatatttaagtacagataaatttaaa
aagataatggagcaagttgtagtaaatgctcagactctagcttctgaactgatttcacat
ggttttagtattgtaagtggaggtactgataatcatatagtaatggttgacttaagaagt
aagaatcttacaggaaaacaatttgaaaaagctcttgaatatgtaggaataacagttaat
aaaaatgttatacctgacgacccacaatcaccatttgtaactagtggtgttcgtataggt
cttacatcaatatctcaaagaggtctgaaagaaaaagaagttatacagatagcagggata
atgaataaggtagcagaaaatattgataataaagaagtattagatgaatgtaaagcagag
gcacaagaacttatatctaagtttccattatatccagaagggtattttgaagattaa
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