Clostridioides difficile 630: CD630_30620
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Entry
CD630_30620 CDS
T00487
Name
(GenBank) Transcriptional regulator, RpiR family
KO
K03481
RpiR family transcriptional regulator, glv operon transcriptional regulator
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdf03000
]
CD630_30620
Transcription factors [BR:
cdf03000
]
Prokaryotic type
Helix-turn-helix
Other families
CD630_30620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
HTH_24
HTH_11
HTH_38
Fe_dep_repress
HTH_28
HTH_DeoR
HTH_36
HTH_3
HVO_A0261_N
HTH_26
TrmB
MarR_2
HTH_AsnC-type
HTH_Tnp_Tc3_1
Motif
Other DBs
NCBI-ProteinID:
CAJ69954
UniProt:
Q184P9
LinkDB
All DBs
Position
complement(3555936..3556721)
Genome browser
AA seq
261 aa
AA seq
DB search
MRLEEMIFFNYNKLNDTDLLIWKYITANKKHCSKMSINELAMKCNVSRATITRFVKKLDL
KGFSEFKVLLSWESEKVHVIENQSFDIACNSIIKYVEDQKNKDYDALCKLLYESRTIYAY
GSGDIQNVVAKQIKRMFLSCQEIIYDFEGRTFDDSFYNIVSKNDVMIIISLSGENENTLN
IARRLKLIGTKIISITEFKNNTLTDLSDESIYISATNISFLQMHPSYKLTMLYFILIELL
FIKYSIYKRHRMITEGIDCKL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagattagaagaaatgattttttttaattataataaattgaatgatacagatttatta
atatggaaatatataactgcaaataaaaaacattgtagtaagatgtcaataaatgaactt
gctatgaaatgtaatgtgtctcgtgcaactattacaagatttgttaaaaaattagattta
aaaggtttcagtgagtttaaagtattattaagctgggaatcagaaaaggttcatgtcata
gaaaatcagtcatttgatattgcatgtaattcaataattaagtatgttgaagatcaaaaa
aataaagattatgatgcattgtgtaaacttctttatgaatcaagaacaatatacgcttat
ggttcaggtgatattcaaaatgtggttgcaaaacagataaagagaatgttcttatcatgt
caagaaataatatatgattttgagggaagaacatttgatgattctttttacaatattgtc
agtaaaaatgatgttatgattattatatctctaagtggtgagaatgagaatacacttaat
attgctagaagattaaaattaataggaactaaaataatttcaattacagagtttaaaaat
aatacattgactgatttaagtgatgaatcaatttatatttcagcgactaatatctcattt
ttacaaatgcaccctagttataaattgacaatgttatattttatattgattgagttatta
tttattaaatatagtatttataaaaggcatagaatgattacagaagggattgattgcaaa
ttgtag
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