Clostridioides difficile 630: CD630_33930
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Entry
CD630_33930 CDS
T00487
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA (23S rRNA(M-5-U1939)-methyltransferase)
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdf03009
]
CD630_33930 (rumA)
Enzymes [BR:
cdf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CD630_33930 (rumA)
Ribosome biogenesis [BR:
cdf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CD630_33930 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
Cons_hypoth95
PrmA
Methyltransf_15
TRM5-TYW2_MTfase
RrnaAD
N6_N4_Mtase
Methyltransf_11
CMAS
Methyltransf_4
DOT1
PCMT
Motif
Other DBs
NCBI-ProteinID:
CAJ70296
UniProt:
Q180P1
LinkDB
All DBs
Position
complement(3967487..3968851)
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AA seq
454 aa
AA seq
DB search
MLSKNEMYIVDIVDIGQGGVGVGKYNGITVFVEGGLIHDKVKVRINKVKKNYAVGDIVEI
IEKSPFRVKRVCSDNLRDCGGCQIQDLDYNKQLEMKTNEVKQVLSRIGKLEDVEVHDTIG
MDNPYRYRNKAQFPIQKNNGIPIIGFYKKKTHDVISTEKCVIQHEINDKIVKIIKTYIRA
YKVSIYDEKTHTGLIRHLVTKIGFTTKEVMVVLVANGNKLPYLKELASVLKENIPGFKTL
VVNVNQKDTNAILGRENIVIYGDGKINDYIGDLVFEISPLSFFQVNPVQTKVLYDKALEY
ANLNDTDTVFDIYCGIGTISLFLAQKAKKVYGIEIIDDAIKDAKINAKLNNIHNAEFYVG
KAEEIVPKMYREGKTANVVVVDPPRKGCDEKVLETIVSMNPERIVYVSCNPSTLARDLDY
LNVHGFKCVEAQPVDMFPHSTHVETCVLLQRRTM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgaaaaacgagatgtatattgtagatatagtagacattggtcaaggcggagta
ggagtaggaaagtacaatggtattacagtttttgtagagggcggattaatacatgataaa
gttaaagttaggattaataaagtaaagaaaaattatgctgtgggagatattgttgagata
atagaaaagtctccattcagggtgaaaagagtgtgtagtgacaatcttagggattgtgga
gggtgtcagatacaagacttagattataataaacaacttgaaatgaaaacaaatgaagtt
aaacaagtactttcgagaataggtaagttagaggatgtagaagttcatgacactatagga
atggataatccatatagatatagaaataaagcacaatttccaatacaaaagaataatggt
attccaattattggcttctataaaaagaagactcatgatgtaatatcgacagaaaaatgc
gtaatacaacatgagataaatgataaaattgttaaaataataaaaacatatataagggcc
tataaggtaagcatatatgatgaaaagactcacacggggttgattaggcatttagtaaca
aaaataggttttacaactaaagaagtaatggttgtattagtagcaaatggaaacaaactt
ccatatcttaaagaattagcttcagtgcttaaggaaaatatacctggatttaagactttg
gttgtaaatgtaaatcaaaaagatacgaatgctattctaggaagagaaaatatagttata
tatggagatggaaaaataaacgattatataggagacttagtgtttgagatttcaccatta
tcatttttccaagtaaaccctgtccaaactaaagtattgtatgataaggctcttgaatat
gcaaatttaaatgatactgatactgtttttgatatttactgtgggataggtacaatatct
ttatttttggcacaaaaggctaaaaaggtttatggaatagaaattatagatgatgccata
aaagatgctaagataaatgctaaattaaacaatatacataatgctgaattttatgttgga
aaggcagaggaaattgtacctaagatgtatagagagggtaagactgccaatgtagtcgtt
gtagacccacctagaaagggatgtgacgaaaaggtattagagactattgtttcaatgaat
ccggaaagaattgtctatgtttcttgtaatccttctactttagcaagggatttagattat
ctaaatgttcacggatttaaatgtgttgaggcacaacctgtagatatgttccctcattct
acacatgtggagacttgtgtgttgctacaaagacgaactatgtag
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