Corynebacterium diphtheriae INCA 402: CDB402_0003
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Entry
CDB402_0003 CDS
T01688
Symbol
recF
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
cdh
Corynebacterium diphtheriae INCA 402
Pathway
cdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CDB402_0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdh03400
]
CDB402_0003 (recF)
DNA repair and recombination proteins [BR:
cdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CDB402_0003 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEX45315
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Position
3545..4738
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AA seq
397 aa
AA seq
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MYIRELSLRDFRSWPECTVTLEPGVTLFVGRNGFGKTNIVEAIGYVAHLGSHRVFHDSAL
VRQGKESARVSVTAVNHGRELTAHLLIKAKGANQAQINRTRLKSPRELLGVVKTVLFSPE
DLSLVRGDPVERRRYLDHVIATRKPRLGGVKADYDKVLRQRNSLLKTAGAALRRGYGADD
GALSTLDVWDSQLARLGGQLIHARHSVVRELDPLVHDAYARIAPESRPAHIRYVSTVPFA
EAVELPSPEEFEAAMLAELGQRRDKEIDRGVSLVGPHRDDLDIVLGDYPAKGFASHGETW
SMCLSLRLAEFHLLRNDGTDPVLILDDVFAELDTQRREKLVSVTAEAEQVLITAAVGDDL
PDTLTESAVHRHFVSVADTPEGRISLLDAATGVPHDG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgtacattcgtgagctttcgcttcgagatttccgctcgtggccagagtgcactgtcact
ttggaacctggggtgacgctttttgttggccgtaatggttttggcaaaacgaacatcgtt
gaggccatcggctatgtggctcatctgggttcgcaccgtgtgtttcacgattctgcgctg
gtccgtcaaggaaaagaatcggctcgtgtgtcggtaacagcggttaaccacggccgcgag
ctcactgcgcatctgctgatcaaagccaagggagctaaccaagcgcagatcaatcgaact
cggctaaaaagcccccgtgagctgcttggtgttgttaaaacggtcctgttttctcctgaa
gatttgagccttgttcgtggtgatccggtagagcgtcgacgctatcttgaccatgtgatt
gctacacgcaaaccccgtcttggcggtgtgaaagcggactatgacaaggtgctgcggcag
cgtaattcgttgctcaaaacagcaggtgctgctttgcgtcgtggctatggtgcagatgat
ggtgcgctttctaccttggatgtgtgggattcccagttggcgcgtcttggtgggcagctc
attcatgcacgtcatagtgtggttcgggagttggatccgctggtgcatgatgcctatgcg
cgtattgctccggagtcgcgtcctgcgcatattcgctatgtgtcgacggtgccgtttgcg
gaagctgttgagttgccgagccctgaagaattcgaggccgctatgcttgctgagctgggg
caacgtcgggataaggaaattgatcggggggtgtcgttggtggggccacaccgtgatgat
cttgatattgttttgggcgattatcctgcgaaggggtttgcgagccatggggaaacgtgg
tcgatgtgtttgtcgttgcgcctagctgagtttcatttgctgcgtaatgatggcaccgat
cctgtgcttattctcgatgacgtgtttgcggagttggatacgcagcgtcgtgagaagttg
gtgagtgtgactgccgaggctgagcaggtgctcattactgccgcggtgggtgatgatctg
cccgatactcttacggagtcggcggtgcatcgtcactttgtcagcgttgcggacactcct
gagggacgtatttcgcttctcgacgccgccacgggggtaccacatgacggataa
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