Corynebacterium diphtheriae INCA 402: CDB402_0249
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Entry
CDB402_0249 CDS
T01688
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cdh
Corynebacterium diphtheriae INCA 402
Brite
KEGG Orthology (KO) [BR:
cdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdh03032
]
CDB402_0249 (topA)
03400 DNA repair and recombination proteins [BR:
cdh03400
]
CDB402_0249 (topA)
Enzymes [BR:
cdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CDB402_0249 (topA)
DNA replication proteins [BR:
cdh03032
]
Prokaryotic type
DNA Topoisomerases
CDB402_0249 (topA)
DNA repair and recombination proteins [BR:
cdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDB402_0249 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEX45560
LinkDB
All DBs
Position
265064..267958
Genome browser
AA seq
964 aa
AA seq
DB search
MAAKTGNKRLVIVESATKAKKIAPYLGDDYIVEASVGHIRDLPRGAADVPAKYKKEPWAR
LGVNTDKGFEPLYVVSPDKKKKVADLKAKLKLVDELFLATDPDREGEAIAWHLLEVLKPK
VPVKRMVFNEITKPAILAAAQNTRELDDNLVDAQETRRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRVIVERERERMAFISADYWDVEAEFDTGKPAQDSNPTSFTGRLTALDGKR
VATGRDFNDRGELKGDAVVVDKQRAEALVEELTGVAMSVTKVEEKPYTRRPYAPFMTSTL
QQEAGRKLHYTSERTMRIAQRLYENGHITYMRTDSTTLSEQGLKAAREQAISLYGADYVA
DAPRRYDRKVKNSQEAHEAIRPAGERFATPGDLHGQLDAEEFKLYELIWQRTVASQMADA
KGTSMKVTITGNNAEFSATGRTITFPGFLRAYVEVSTLADGRNVADNAEHHLPRLAEGDG
VETKNLEADGHSTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVYSRGNALV
PSWVAFAVIGLLEKSFAALVDYDFTSSMEDELDEIAAGHENGAHWLTGFYFGDAEASDAK
AESIARHGGLKALVGDNLEQIDARLVNSLPLFKDQEGRDVNVRVGRYGPYLERQVGVSED
GEPEYQRANLSDSTTPDELTLELAEKLFATPQSGRELGRNPKNNRMIVAKEGRFGPYVTE
LVNDDERTEVETKAEEIVAAEREAEDLQRAAEGKRAKNWGTKTAAAQKEKRIAQIIEETL
KPGTASLFKTMEPSSVTLDEALQLLALPREVGVDPSDNEVITAQNGRYGPYLKKGSDSRT
LASEDQIFSITLDEARRIYAEPKRRGRGATSQSVIKQLGDNDVSGKPMSVRDGRFGPYVT
DGTTNASLRRGDDPTQLTEARANELLSERRAKEAADGGSSKKATKKTSKKTTKRVAKAGA
RKKK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaagactgggaacaagcgtctggtcatcgtcgagtctgcgacgaaggccaaa
aagatcgcaccgtatcttggcgatgactacatcgtcgaggcatcggtcggtcatatccgt
gacctgccgcggggtgctgcggacgttcccgctaagtacaaaaaggagccatgggcgcgc
ttaggcgtgaacaccgacaaaggctttgagccgttgtacgtggtcagcccagataaaaag
aagaaggtggccgatcttaaagccaagctcaagcttgtcgacgagctcttcctagccaca
gaccccgaccgcgagggtgaagccatcgcttggcatctgcttgaagtactcaaacccaag
gtgccggtcaagcgcatggtgtttaacgagattactaagcctgcgattcttgccgctgcg
caaaacacccgcgaactcgacgataacctcgtagacgcccaagaaacacgccgtatcctc
gaccgcctctacggctacgaggtatccccagtgctgtggaaaaaggtcatgccacgcctg
tccgccggacgcgtgcagtccgtggccacccgcgtgatcgtagagcgcgagcgtgagcgc
atggcgtttatctccgctgattactgggatgtggaggcggaattcgataccggcaagcct
gcacaagatagcaacccaacctcctttacgggccgtttgacggctttggacggcaagcgc
gtggctaccggccgtgacttcaacgaccgtggtgagctcaaaggtgatgcggtggtcgtc
gacaagcagcgcgctgaggccctcgtcgaagagctaaccggcgttgcaatgagcgtgacc
aaggtggaggaaaagccttacacccgccgcccctacgcgccatttatgacctcaaccctg
caacaagaggccggccgcaagctgcactacacctccgaacgcaccatgcgcatcgcgcag
cgactgtacgaaaacggccacatcacctacatgcgtaccgactccaccactttgtcggaa
caaggcctcaaagccgcccgtgaacaggcaatttccctgtacggtgccgactacgtggca
gacgcaccacggcgctacgaccgcaaagtgaaaaactcccaagaagcccacgaggcgatc
cgtcccgcaggtgagcgatttgccaccccaggcgacctccacggccaactcgacgcggag
gaattcaaactctacgaactgatctggcagcgcaccgtggcctcccagatggccgacgcc
aagggcacctccatgaaggtgaccatcaccggcaacaacgccgaattctccgcaaccggc
cgcaccatcaccttccccggtttcttgcgcgcctacgtggaagtcagcacgcttgccgac
ggccgcaacgtcgccgacaacgccgagcaccacctgccgcgcctagctgaaggcgacggc
gtagaaaccaagaaccttgaagccgacggacactccaccaacccaccagcgcgctacacc
gaagccagcctggtcaagaagatggaagacctcggcattggccgcccatcaacgtatgcg
tcgatcatcaaaaccatccaagaccgcggctacgtgtactcccgaggcaatgccctggta
ccaagctgggtagcattcgccgtgatcggcctgctggaaaagagcttcgcagccctcgtc
gactacgacttcacctcctccatggaagacgaactcgacgagatcgcagccggccacgaa
aacggtgcccactggcttaccggcttctacttcggtgatgctgaagcctccgacgccaaa
gcagagtcaattgcccgccacggtggtctgaaggcactcgtcggcgataacctcgaacaa
atcgacgcacgcctcgtcaactcgctgccactgtttaaagaccaagaaggtcgcgacgtc
aacgtacgtgttggccgttacggtccatacctcgaacgccaggtcggcgtgagtgaagat
ggcgagccagagtaccagcgcgctaacctctcggattcgaccaccccagacgaactcact
ctcgaactggcagaaaagctctttgccaccccgcagtccggccgtgagctaggccgcaac
cccaagaacaaccgcatgatcgtggctaaggaaggccgctttgggccctacgtcaccgag
ctagtcaacgacgacgagcgcaccgaggtagaaaccaaagccgaagagatcgtcgccgct
gaacgtgaggcagaagacctccagcgtgccgccgagggcaagcgcgcaaagaactggggt
accaagaccgcagcagcgcaaaaagaaaagcgcatcgctcagatcatcgaggaaaccctc
aaaccaggtaccgcctcgttgttcaagacaatggagccctcttccgtcaccctcgacgaa
gcactccagctgctggccctaccacgcgaagttggcgttgaccccagcgacaacgaagtg
atcaccgcccagaatggtcgctacggcccatacctgaagaagggcagcgactcgcgtacc
cttgcgagcgaggaccagatcttcagcatcaccctcgacgaagcacgccgcatctacgcg
gagcccaagcgtcgcggtcgcggagccacctcacaatcggtgatcaagcaactcggtgac
aacgacgtctccggcaagcccatgtcggttcgcgacggccgcttcggcccctacgtcacc
gacggcaccaccaatgcgtcgctacgccgtggcgacgaccccacgcagctcaccgaagcg
cgcgccaatgagctcctctccgagcgtcgcgccaaagaagctgccgacggtggctcatcg
aagaaagctacgaagaagacctcgaaaaagaccaccaagcgcgtggccaaagcgggtgct
cgcaagaagaaatag
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