Corynebacterium diphtheriae INCA 402: CDB402_0636
Help
Entry
CDB402_0636 CDS
T01688
Symbol
uvrD
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdh
Corynebacterium diphtheriae INCA 402
Pathway
cdh03420
Nucleotide excision repair
cdh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDB402_0636 (uvrD)
03430 Mismatch repair
CDB402_0636 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdh03400
]
CDB402_0636 (uvrD)
Enzymes [BR:
cdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDB402_0636 (uvrD)
DNA repair and recombination proteins [BR:
cdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDB402_0636 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CDB402_0636 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ADDB_N
HHH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEX45943
LinkDB
All DBs
Position
663141..665192
Genome browser
AA seq
683 aa
AA seq
DB search
MINLDDLDDDQRAAAEAPRGPVAILAGAGTGKTRTITYRIAHLIDRGMASPHRVLAVTFT
RRAAGEMRHRLGLMGVGGVQAQTFHSAALRQLRYFWPQVAGNLPWRIVDNKFSLVGRATR
SVGVESSTENVRDLLSEIEWAKAALITPDNYVERLNGRKTPVAAEKVAEVYRRYEQSKTT
PEGMLLDFDDLLLHTAGAIENSAAIAEEFRQQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DVTVVGDANQTIYSFTGASPDYLLGFSRKYPHATVVKLQRDYRSTPQITDLANRVIDQAV
GRIAGTRLELEGMRTAGPQPEFQEFSDEPAEAHAVALKIKQLLAQGVPASEIAILYRINA
QSATFEQALDDAGIVYQVRGGEEFFQRSEIKQAMSEIIRATQRDDLPDARGVDLERIVRA
ILAPLGLSKHEPEGARARERWQSLEALAELSLEIGQATPDLNLQGLLAALNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPISHAMKAGDHAIEEERRLFYVGVTRARE
ILYCSWAKARQEGGRATRKRTRFLDSIVPELDVSSVPPRSKRRQRCRVCGTTLNSPAERI
VGRCDQCPSGVDGEVFETLRKWRADTARELNVPAYIVFTDATLHAIAENLPQSAEELMQI
SGIGQVKVERFGPSLLETLAQFQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattaacttggatgatcttgacgatgaccagcgtgcagccgccgaggcgccgcgtggt
ccggtagccattttggcaggcgcagggacaggtaaaactcgtacgatcacctaccggata
gcgcacttgattgaccgtggcatggcaagccctcatcgcgtgctcgcagttaccttcacg
cgtcgcgctgctggggaaatgcggcatcgtctggggttgatgggtgtcggtggcgttcaa
gcccaaacatttcactctgctgcgctgcgacaactacgctatttttggccacaggtagcc
gggaatttgccatggcgaattgttgacaacaaattttcactggtgggtcgcgcaactcgt
agcgtcggggtggaatcctcaacagaaaatgttcgagatctactcagcgaaatcgaatgg
gccaaagcagcactgatcactcctgataactatgtggaacgcctcaacgggcgcaagacc
ccagtagcagccgaaaaagtggcggaagtatatcgacgatacgagcagtcgaaaactaca
ccggaaggaatgctgctcgactttgatgacttgctgcttcataccgccggagccatcgag
aattctgctgctatcgcagaggaatttcggcaacaataccgcacgttcgttgtcgacgag
taccaggacgtgacgccactacagcagcgggtcttagacgcatggcttggcgaacgcgat
gatgtgaccgtggtgggcgatgccaatcagacgatctactcgtttacaggcgcttcacca
gactatttgctgggattttcacgcaaatatccccatgccacggtggtgaaactgcaacga
gactaccgttctacaccgcaaattacagatcttgctaaccgcgtgatcgaccaagcagta
gggcggatcgcagggactcggttggaattagaaggcatgcgtacagccgggccacaacca
gaatttcaagaattcagcgacgaacccgcagaagcacacgccgtagccttgaaaatcaag
cagcttctagcacaaggcgttcctgcctccgagattgcgattttgtaccgcattaatgcc
caatccgcgactttcgaacaagccctcgatgacgccggaattgtgtatcaagttcgcggc
ggtgaggaattcttccagcgttcggaaatcaaacaagcgatgtcagagatcatccgagca
acccagcgtgatgaccttcccgacgctcgtggagtagacctagaacgcatcgtgcgtgca
atattagcgccgctgggcttgagcaaacatgaaccggaaggcgcccgcgcacgggaacgc
tggcagtcgttggaagctcttgcagaactgagcttggaaattggccaagcgacaccagac
ttaaaccttcaagggttattagcagcactcaaccagcgagcaagcgccaagcatcctccc
accatgcaaggggttaccttggcatccctccacgcagcaaaaggcttggaatgggacgcc
gtgttcctcgttgggcttgtcgacggcaccctgccgatctctcacgcaatgaaagcgggc
gatcatgccatcgaggaagaacgccgcctgttttatgtgggcgtgacgcgtgcccgagaa
attttatattgctcgtgggcaaaagctcgccaagaaggcggacgtgcaacacgaaagcgg
actcgttttttggacagcatagttcctgaactcgatgtttcctccgtaccaccacgctct
aaacgacgccagcgctgtcgtgtatgcggcaccacattgaacagtcccgcagaacgcatc
gtaggacgctgtgaccaatgccccagcggagttgatggagaagtgtttgaaactctgcgg
aaatggcgagcggatacagcccgtgaactcaacgttccggcctatattgtgttcaccgat
gctaccttgcatgcgatagccgaaaatcttccccaatccgccgaagagctgatgcagatt
tctggaatagggcaggtcaaagtagaacgttttggcccaagtctgctagaaacgcttgct
cagttccagtaa
DBGET
integrated database retrieval system
