Corynebacterium diphtheriae INCA 402: CDB402_1081
Help
Entry
CDB402_1081 CDS
T01688
Symbol
irp2F
Name
(GenBank) putative siderophore biosynthetic protein
KO
K04784
yersiniabactin nonribosomal peptide synthetase
Organism
cdh
Corynebacterium diphtheriae INCA 402
Pathway
cdh01053
Biosynthesis of siderophore group nonribosomal peptides
Brite
KEGG Orthology (KO) [BR:
cdh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
CDB402_1081 (irp2F)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cdh01004
]
CDB402_1081 (irp2F)
01008 Polyketide biosynthesis proteins [BR:
cdh01008
]
CDB402_1081 (irp2F)
Lipid biosynthesis proteins [BR:
cdh01004
]
Polyketide synthase
Modular PKS
CDB402_1081 (irp2F)
Polyketide biosynthesis proteins [BR:
cdh01008
]
Nonribosomal peptide synthetase (NRPS)
Nonlinear NRPS
Yersiniabactin synthetase
CDB402_1081 (irp2F)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
PP-binding
AMP-binding_C
Methyltransf_23
DUF7080
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AEX46384
LinkDB
All DBs
Position
complement(1154492..1162063)
Genome browser
AA seq
2523 aa
AA seq
DB search
MIKEEQIREELLASLHQILGEDAEIGIDDNLLSHGLESLPTVRLLADWMKQGHRVSFGDF
MRAPTVRQWAKMLVESTPNHSTDAIESPKDGFAAPIDDSVPFDLTDVQYAYWIGRNSSQQ
LGGVGTHGYVEVESRSINIDRLQQSWLTLLRSHPMLRACYTEDGKQYVLPEPPHPTILIH
DLTKMDESTREEALLSTRERLSHRLLDIATGHVVSLEVSLLPQDVAVIHFDIDLLVCDVQ
SFQIILHDLAHHYATGEAPDADPSWSFARYLAGHAREGVADIDRDQAYWRNRLSELPGAP
TLPMSHGTNEEQAHRFVRRSRSFDSATWSRLREVCEHHATTPAMVLLTAYARTIGQWSEN
KKFLMAVPLFNRGSDTAIKNVVADFTALTLTSIDQSTRRTFSEDLKDIQASFYEDSSHSQ
YSAVRVLRDLRASRGEQVLAPVVFSCNLGDPLVGQEFIDTFGEISYMISQTPQVWIDLQV
FTTVNGFLIVCDAVEQLFPEKMLDDLFATLVMEIDKAITDDLSHSDPVESPGAQARRASR
AEVASWRLPDTTLVDEVIAAARCHPQATAIRSASGDVITYQDLEEQATTIASALVNSGVG
RGALIAVMVERGPRQIIGALAAMMAGGAYVPVSLQQPESRIAALLGASQVTHLITDRPDK
VLSETAVQVVDFTSATGTANLPQLHPQDPAYVIYTSGTTGTPKGVEICHGAAWNTISEIN
RRLGVGPTDRLLSVSSFDFDLSVYDAFGLLSAGGELVTIPDDARRDAKKWVSLVDSLGIT
IWNSVPTLFEMLLSAADRTPGKLSSIRHVLLSGDWIDTSLPERMRTVTPQAHLLAMGGAT
EASIWSNGLDLDVVSPEWTSIPYGRPLAKQMYRVVSNNGQDCPDYSVGELWIGGLGVATQ
YVGDPGLTETKFVISEDSRWYRTGDMGRFWADGTIEFLGRSDNQVKVRGHRIELGEIESA
CEALLPIERAVCITHQGASSSPSLVTFAQFTPSHVARTTPEQFATSLRAKVNDVLTEGDI
RTSVEHDEHLQTAYAFSVMRRWEEQLTGVGTPNHLREHRNRWQTWLGKADEHPATADLLL
DDESFGALERFVTPFEQAFVMAEKQRSIAEFIQSPDSMSVEQFLATRPLGRLVHRVLGAV
VRECSTHSTSELKILEIGSRRPEASADYAAIAGTSAYVLADPYRHHLEHAGQRVGNTFTY
RQLGVTSTPQPTPGEAVTKADLVLCNQTLHQSEDIEKTLCEAWGLSAPGATMVVVEPTAP
SPMSDITAAFIANNTTDARAETGTVLLSARSWKEILQRTGWKPVEHVEITKTTALIIAER
ASSNESVTLCDSDYAKATNLLATRLPEYMLPKRILELAKFPLTSNGKIDRKALTALVPEY
FDNEPAVTELPHTATEKRLIDIWDELLHTSSNVNSDYFRLGGDSLTATRLRRTIEQCFGV
EFPLENIFDVPLLRDMAARIDQIAEVPHQQSDLPKIVHGSEQYAPFPLTEVQQSYLIGSS
GAIELGDVSSHCYFEMSTACLDPERVEDAFNALIKRHPMLRTVVCEDGLSQRVLPEVPRY
RIALIRSGNADNEDTLDEIREEMSRQKFDPTQWPCFDVRYVAEPDAGRLLLSFDNLFIDG
WSMFHIFREWKQAYDHGVDSLDPAIPYSFKDYVEATIELSHSDIHKRDQAYWESAVDTIY
PAPQLPVTDINGANTSQFCRHHALVDAAKWRRIKQRVREEGMTEAVFLAEVYAEVLARYS
DEPRLSINLTRFDRTRFAPEVDHIVGDFTSLSILSVDTQCAPSFRDRAAALHRRMFSNLD
HGSVSGVSVQRMLTKQRGARVTMPVVFTCGLGVVEHPESDQSPYLGVIDHGLSQTPQVWM
DLQVYEHDGGLMLNMDAVEAIFPDDMVAELFTSLTATLSHLAESPELWNAPTSTIAPTTN
APTADRINDTDRELPGADKSLLGLYQKGLAEHGDNLAVIDATTQWTYEQLNEQSDKWAQL
IAATDPAPGDLVGIMMEKSAQQIAAVLGAMKAGCAYLPLSVDQPVGRNTSIINDAGASIV
AMDHPDDDFAALAEHCTVITLADVARHRPGDQALSESSPTPSSLAYVIYTSGTTGTPKGV
AITHESAVNTIVDVNERLGVTPTDRILGISELNFDLSVYDIFGMFARGATLVLPSPADKR
DPQCWADAVTTHSVTLWNSVPALFSMYVEHLRERSLIGSSVRSALLSGDWIPVNIAYQVS
TLFRDCTVFAAGGATEASIWSNWYEVGVDDASRTSIPYGTPLANQRMYILDEALNPRPTH
VPGDLYIAGRGLAMGYWKDPEKTAASFITHPRTGERMYRTGDKALYNHLGHIIFLGREDG
QVKVNGYRIELGEIESTARKFNELRDCVAVNDHGIVLYVVTHEGFNMAALNNHLAESLPA
YMRPRVISRIDGLPRSWNGKIDRKSLEGKTFEQPQTRERSRNHRDSGIITILQELLGPKE
ISIDDDFFTIGADSLTAVRLTNSIRREMSVEISIRDVFNHPTVRELSDLIADIVGSDVEE
GEI
NT seq
7572 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagaggaacaaattcgcgaagaactcctcgcctcgctccaccagatcctcggc
gaagatgccgaaatcggcatcgacgacaacctgctctcccacggcctggagtcacttcca
acagtccgtctgctcgctgattggatgaaacagggacaccgcgtctcctttggagatttc
atgcgcgccccaacggtaaggcagtgggcgaagatgcttgtagaatccacaccaaaccac
agcactgacgccattgagtcccccaaagatgggtttgccgctcccatcgacgattccgta
ccctttgacctcacagatgtccaatacgcctattggattggccgcaattcctcgcagcaa
ctgggcggggtgggcacccacggctacgtagaggtcgaatcccgcagtatcaatatcgac
cgattgcaacaaagctggctgacgctgctacgttcccacccgatgttgcgcgcctgctac
accgaagatggcaagcaatatgtgctgccagagccgccccaccccaccatcctcattcat
gacctcaccaagatggacgagtccacgcgcgaagaagctctgctatccacgcgcgaacgc
ctttcgcaccgactgttggacatagctaccggccatgtggtatctttagaagtcagcctc
ctccctcaggatgtagcagttattcacttcgatatcgacctgcttgtgtgcgatgtgcag
agtttccaaattatcttgcacgacctcgcccaccattacgccaccggtgaagcccccgac
gccgacccgtcgtggagtttcgctcgctacctcgctggacacgctcgcgaaggcgtcgcc
gatatcgaccgtgaccaggcatactggcgcaatcgcctctccgagttgccgggtgcccca
accttgccgatgagccacggcaccaacgaggaacaagcacaccggtttgtacgccgcagt
cgatcattcgattcggcaacttggtcgcgcttgcgtgaggtgtgtgaacaccacgctact
accccagcaatggtgttgctgaccgcctacgcccgcaccatcggccaatggagcgagaat
aaaaaattcctcatggccgtacctctgttcaaccgcggttcagacacagcgataaagaat
gtcgtcgcagactttaccgccctgacactcaccagtatcgatcagtccacacgccgcact
ttcagcgaggacctcaaggatatacaggcctctttctatgaggattcgtcacattcacag
tattcggcggtgcgggtgctgcgagacctacgtgcttccagaggtgagcaagttttggct
cccgtggtgttctcctgcaacctgggagacccactggttggccaagagtttatagatacc
ttcggagagattagctacatgatctcccagaccccccaggtgtggattgacctccaagtc
ttcaccaccgtcaacggcttcctaatcgtctgcgacgcagttgaacagttgttccccgag
aagatgctggacgatctcttcgccaccctagtgatggagattgacaaggcaatcaccgac
gatctctcgcattcagacccggtagagagcccaggagcgcaggcccgtcgagcgtcacgt
gccgaagttgcctcttggcggctgcctgacaccacccttgtcgatgaggtgattgccgct
gcacggtgccacccccaggccacggccattcgcagtgcaagcggcgacgttattacctac
caagatttggaagagcaagccaccaccatcgcctctgctttggtgaattccggggttggg
cgaggcgctttgattgcagtgatggtggagcgtggtcctcgccagattattggtgcgcta
gccgcgatgatggcgggcggagcatatgtaccggtgagtctacagcaaccggaatctcgt
attgccgctctcttgggggcaagccaagtaacgcatctgattactgaccgacccgataag
gttctgagcgaaactgcagttcaggtagtagatttcacgagcgctaccggcacagccaat
cttccgcagctgcatccacaagacccggcctatgtaatctacacctctgggaccactgga
acaccaaaaggagtcgagatttgccacggtgctgcatggaacaccattagcgagatcaac
cgtcgcctgggcgttggtccgacagaccgcctactaagcgtatcttcctttgatttcgat
ctctcggtgtacgacgccttcgggctcctttctgctggcggcgaactggtaaccatccca
gatgatgcgcgccgcgacgccaagaagtgggtatcgctggtggatagtttaggcataact
atctggaattcggtgcctactttgtttgagatgcttttatctgcggctgatcggacaccg
ggcaagctcagcagcatacgccatgttctgctatctggcgactggattgataccagcctg
cctgagcgcatgcgcacggttaccccgcaggcacacctattagctatgggcggtgcgacg
gaggcatctatctggtccaatggtctcgacctcgatgtagtgtcacccgagtggacctca
attccctatggtcggccgcttgccaaacagatgtaccgggtggtgtccaacaatggccag
gactgtcccgattattctgtgggggagctgtggattggcggcctgggcgtagctacacaa
tatgtcggcgaccccggactcaccgaaactaagttcgtaatctcggaggactcacgttgg
taccgcacaggcgatatgggccggttctgggccgatgggacgatcgagtttttaggccgc
tcggataaccaagtcaaagttcgtggccaccgcatcgaactcggcgagatcgagtccgcg
tgtgaagcgttgctgccaatagagcgtgccgtgtgtatcacgcaccaaggtgcatcatcg
tcaccatctttggttacgtttgctcagttcacaccgtcacatgttgcccgaactactccg
gagcagtttgcgacgtcattgcgcgccaaagtcaacgacgtgctgaccgagggcgacatc
cgcacgtccgtcgagcacgatgagcatttacagaccgcatatgccttctcagtgatgcga
cgctgggaggagcaactcaccggcgtggggaccccaaaccacctccgcgaacaccgtaat
cgctggcagacatggctaggcaaagcagatgaacacccggctaccgcagacttgcttcta
gacgacgagtcgttcggcgcgttagagcgttttgtcacccccttcgagcaagccttcgta
atggcggagaagcagcgcagtatcgctgagttcatccaaagcccagattcgatgtcggtg
gagcaattcctcgcaacccgtccgttgggtcggttggttcaccgggtcctcggcgcggtt
gtgcgtgaatgcagtacccactcaaccagcgagctcaagattcttgagatcgggtcacgc
cggcccgaggcctctgcggactacgcggctatcgcggggacgagcgcatacgtgctcgct
gatccctatcgtcatcacctcgaacatgccggacaacgtgttggtaacaccttcacgtac
cgccagctcggagtcactagcacgccccaaccgactcctggggaggcagtgacgaaggcg
gacttggtgctgtgcaaccagacgctgcaccagagcgaggacatcgagaaaacgctctgt
gaggcctggggcctcagcgcccctggagcaacgatggtggtggtagagcccactgccccc
tccccgatgtccgatatcaccgccgcatttattgccaacaataccacggacgctcgggcc
gaaaccggtacagtactactcagcgcccgcagctggaaagaaatcctgcagcgcactggg
tggaaacctgtagagcatgtagagatcactaaaacgacggcgcttatcatcgccgaacgc
gctagttccaacgaatcggtcacactatgcgattctgactatgccaaggctacaaaccta
ctggccacccgccttccggagtacatgctaccgaaacgcatcctggagctagcgaagttt
ccactcaccagcaacggcaagattgaccgcaaagcgctcacagcattagtgccggaatac
ttcgacaacgagcccgctgtcaccgaacttccgcacaccgccaccgagaaacggctcatc
gatatctgggatgagctgctgcacaccagctccaacgtgaactcagactactttcgcttg
ggtggtgattctctcacagcaacacgcctgcgccgtaccatcgaacagtgttttggcgtg
gaatttccgttagagaatatctttgacgttccgttgctgcgcgacatggccgcccgaatt
gaccagatagccgaagtcccccaccagcaatcggatcttcccaagattgttcacgggtct
gaacagtacgctccgttcccgctgactgaggtgcagcagtcctatctcatcggcagctct
ggagccatcgaactcggcgacgtttccagccactgttactttgaaatgtccactgcctgc
ctagacccggagcgagtggaagacgcgttcaatgccctgattaaacgccatcccatgctg
cgcaccgtcgtgtgtgaggacggattgagtcagcgtgtgttgcccgaagtaccacgctac
cgcattgccctcattcgctccggcaacgccgacaatgaggatactctcgatgaaatccga
gaggaaatgtcccgccagaagtttgatcccactcagtggccatgctttgacgtgcgctac
gtagccgagcccgacgcgggtcgactgcttttaagtttcgataacttgtttatcgacggc
tggagcatgttccacattttccgtgagtggaagcaggcctacgaccacggcgtagacagt
ctcgatccggcaatcccctattcatttaaagactatgtcgaagccacgattgaactgtca
cacagcgacatccataagcgtgaccaagcctattgggaatcggcagtggatactatttat
cctgcaccgcagttgccggtgaccgacataaacggcgctaatacctcgcagttttgccgc
caccacgccctggtggacgctgcgaagtggcgccggattaagcaacgggtacgtgaggag
gggatgaccgaagccgtattcctagccgaggtatacgccgaagtcctagcgaggtacagc
gatgagccgcgacttagcatcaacctgacccggttcgaccgcactcggttcgcccccgag
gttgaccacatagttggcgacttcaccagcctatctattctcagcgtggatacccagtgt
gcaccatcgttccgggaccgcgctgcagcgctacacaggcgcatgttcagcaatctcgat
cacggcagtgtctccggcgtgtcggtgcagcgaatgcttactaagcaacgcggtgctcgg
gtaaccatgccggtggtcttcacgtgtggcctgggcgtcgtggagcaccccgagtcagat
cagagtccttacctgggcgtaatcgatcatggcctatcgcagacgccacaggtatggatg
gacctccaggtctatgaacacgatggtggcctgatgctgaatatggacgcggtcgaggcg
atcttccccgacgacatggtggcggagcttttcaccagccttacagccactctctcgcac
ctcgcagagtcccctgaactctggaacgcgcccaccagtaccatagctccgacgaccaac
gcgcccaccgcagatcgaatcaacgacacagaccgggaactccccggagcggataagagc
ctactggggctgtatcagaagggacttgccgagcatggtgacaacctcgcggtgatagac
gccaccacgcaatggacatacgagcaactcaatgagcagtcggataagtgggcccagctt
attgctgcaactgacccggcgcctggtgatctcgttggcatcatgatggaaaagtccgca
caacagatcgcagcggtactaggcgcaatgaaggccggatgcgcctacttgccgctgagc
gtggaccaaccggtggggcgtaacacttccatcatcaacgatgcgggtgcatccattgtt
gcgatggaccatccggacgatgatttcgctgcgttagccgagcactgcacagtcatcact
ctggccgatgtcgcccggcatcggccaggtgaccaggccttaagcgaatcgagtccgaca
cccagctcgcttgcgtacgtcatctacacgtctggtacgacgggcactcccaaaggagta
gccatcacccacgagtcggcggtcaatacgattgtcgatgtcaacgaacgcctcggggtg
actccgaccgaccggatattggggatttcagagctaaacttcgatctatcggtatacgac
atcttcgggatgttcgcgcggggtgctaccttggtgttgccatctccagcagacaaacgt
gatccgcagtgctgggcagatgccgtaactacgcactcggtgacgctgtggaactctgtg
ccagcacttttttcgatgtacgtggaacacctccgcgaacggagcctcattggttcctcc
gtacggtcggcactactcagcggagattggatacctgtaaatatcgcttaccaggtcagc
accctcttccgggactgcacagttttcgctgctgggggtgctaccgaggcatcgatatgg
tcaaactggtacgaggtaggcgtcgatgatgcctcgcgtaccagcattccctatggaacg
ccgctggcaaatcagcgaatgtacatcctcgatgaggccctgaacccccgacccacgcat
gtgccgggagacctttacattgccggacgtggcctggccatggggtactggaaggaccca
gagaagaccgcagcatcattcatcacccacccccgcaccggcgaacgaatgtaccgcacg
ggcgacaaggccctctacaatcaccttggtcacatcatcttcctggggcgcgaggacggt
caggttaaggtcaacggctaccgcatcgaactcggtgagatcgagtcaacagcacgaaaa
ttcaacgaactccgcgattgcgtcgctgtcaacgaccatggcattgttctctacgttgtt
acgcatgagggctttaacatggcagcactcaataaccacctcgccgagtctctccctgcc
tatatgcgtccacgcgtgatatcacgcattgatgggctaccacggtcttggaacggcaag
attgatcgcaagagtttagaaggaaaaacctttgaacaaccacaaacaagggaacgctct
cgtaatcaccgagattcgggtatcattaccatcttgcaagaactcctcgggcccaaggag
atcagcatcgacgatgacttcttcaccatcggtgccgactcgctcacggccgtgcggctt
actaactctattcgtcgagaaatgtcagtagagatctccatacgtgacgtattcaaccat
ccaacggtccgagaattgtccgacctgatcgccgacatcgtcggcagcgacgtagaagaa
ggcgaaatttag
DBGET
integrated database retrieval system
