Corynebacterium diphtheriae INCA 402: CDB402_1381
Help
Entry
CDB402_1381 CDS
T01688
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdh
Corynebacterium diphtheriae INCA 402
Brite
KEGG Orthology (KO) [BR:
cdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdh03016
]
CDB402_1381 (truB)
Enzymes [BR:
cdh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDB402_1381 (truB)
Transfer RNA biogenesis [BR:
cdh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDB402_1381 (truB)
Prokaryotic type
CDB402_1381 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
HK
Motif
Other DBs
NCBI-ProteinID:
AEX46680
LinkDB
All DBs
Position
1500101..1501003
Genome browser
AA seq
300 aa
AA seq
DB search
MNDALANSGLVIVDKPQGMTSHDVVSKIRRTFSTKKVGHAGTLDPMATGVLVLGLERGTK
FLAHMVASTKSYTATIRLGAATTTDDREGETITSASPDQLAGITETKISDAVKQFRGSIM
QRPAAVSAIKIDGKRAHQRVREGEKVEIPARPVTISRYDILEIRRDAAFIDIDVEVDCSS
GTYIRSLARDLGKELGVGGHLTALRRTQVGPFTLDNAVTLEKLEENPHVSLTLDQALAAS
YPVLSVSEKEASDLAMGKWLTPRGLKGIHAAVDPHGRAIALVKEQGKRLATIFVARPSTL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccctcgcaaactcaggccttgtgattgtcgacaaaccccaaggaatgacc
tcccacgacgttgtttctaaaatccgtcggaccttttccaccaaaaaggtgggtcatgcc
ggaaccctcgaccctatggctacaggagtgctcgtattaggactagagcgcgggaccaaa
ttcctagcacatatggttgcgtctacaaagtcctatacggccactattcgtctcggtgct
gctactactaccgacgaccgtgaaggcgaaacgatcacttcagcttcaccagatcaactg
gcaggaatcaccgaaaccaagatctccgatgccgttaagcagtttcggggatctatcatg
caacgtcctgccgcagtgagcgctatcaagatagatgggaaaagagcgcatcaacgcgta
cgagaaggtgaaaaagtagaaattccagcacggccggtcaccatttctcggtatgacatt
ttagagattcgtcgagacgcagctttcatcgacatcgacgtagaagttgattgttcttcc
ggaacctacattcggtcactagcccgtgatctcggcaaagaactcggagtaggtgggcac
ttaaccgcgttacgacgaacacaagtagggccgtttacgctcgataatgctgtaacactc
gaaaaattggaagaaaacccacacgtatctttgacccttgaccaagcattagcagcgagc
tacccagttctttctgtttcagaaaaagaggcgagtgatctcgccatgggcaaatggctc
actccacgcggtctgaaaggaatccatgcagcggtcgatcctcatggacgtgctatcgcc
ttggtaaaagaacaaggcaaacggctagccaccatatttgtggcacgtccatcgaccctt
taa
DBGET
integrated database retrieval system
