Corynebacterium diphtheriae INCA 402: CDB402_1484
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Entry
CDB402_1484 CDS
T01688
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cdh
Corynebacterium diphtheriae INCA 402
Pathway
cdh03030
DNA replication
cdh03430
Mismatch repair
cdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDB402_1484 (dnaE)
03430 Mismatch repair
CDB402_1484 (dnaE)
03440 Homologous recombination
CDB402_1484 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdh03032
]
CDB402_1484 (dnaE)
03400 DNA repair and recombination proteins [BR:
cdh03400
]
CDB402_1484 (dnaE)
Enzymes [BR:
cdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDB402_1484 (dnaE)
DNA replication proteins [BR:
cdh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDB402_1484 (dnaE)
DNA repair and recombination proteins [BR:
cdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDB402_1484 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AEX46783
LinkDB
All DBs
Position
complement(1614436..1617996)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAKKSSFVHLHNHTEYSMLDGMAKVDMLAEEVVRQGMPAVGMTDHGNMFGSDAFYRAMKA
AGVKPIIGIEAYMAPGSRLHKERVRWGEPHQKSDDVSASGAYLHQTMLAENVEGLHNLFY
LSSMASYEGQLGKWPRMDAELIAEHATGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGKENYFLELMDHGLEIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLC
VQTGKTLSDPDRFKFDGSGYYIKTAEQMRETWDSLVPQACDNTLWIAERVQDYGEIWEPH
PHDRMPIADVPEGHTPTSWLRHEVHEGLRMRFNGGAVPQNYLERAEFEIDVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYAAQRWGEDKIAQVITFGTVKTKQALKDSARVQYGQEGYKMADR
ITKELPPAIMAKDIPLSGIMDPEHPRYGEAGEVRHLIETDPDVRKIYDTARGLEGVVRQA
GVHACAVIMASVPLLEHIPMWKRANDGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDC
LENIKINRNEELDLEALQTDDPNVYKLLSSGDTLGVFQLDSGGMQELLKRMQPTGFNDIV
ASLALYRPGPMGVNAHWDYADRKNGRKPIEPIHPELEEPLKEILEETYGLIVYQEQIMEI
SRKLANYTAGEADGFRKAMGKKKPEVLAKEYKKFSEGMFSNGYSKAAVDALWGTIEPFAS
YAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKDKSAIYLSNCRHLDISVLS
PDVNESHLNFMPVGEDIRFGLGAVRNVGEDVVAAIIKAREEKGAFTDFSDYLDKIDITAC
NKRVTESLIKAGAFDSMDHPRKGLLLIHEDAVDAVTSTKKAADKGQFDLFAGLGADAEEV
NNVFAVQIPDAQWDRKHQLALEREMLGLYVSGHPLDGYEEALEAQTDTPLTTILSGELRN
GAEVTIGGIISGVDRRYSKKDGSPWAIVTMEDHHGAQVDLLVFNKIYAIVGPQIVEDNII
LAKAHVSIRDDRMSLFCDDLKVPELGPGNGAGLPLRLTLRTDQCTMENIAKLKQVLSNNK
GDSDVYLNVVHGEEKTVMILGEHLRVNRSGNLMGDLKATMGPGILG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaatcttcctttgttcacttacataatcacaccgagtattcgatgctcgac
ggaatggcaaaagtggacatgttggcagaagaagttgtcaggcagggcatgcctgcagta
ggtatgaccgatcatggaaacatgtttggatccgatgcattttatcgggcaatgaaagct
gccggggtaaaaccgatcatcggtatcgaagcctatatggcacctggatcgcgcttgcac
aaggaacgtgtgcgctggggtgagccccatcaaaaatccgacgacgtctcagcctctggt
gcctatctccaccaaaccatgctggccgaaaacgttgaagggcttcacaatcttttctac
ttgtcttcgatggcatcgtatgaaggccaattaggtaaatggcctcgaatggatgccgag
ctgatcgcagagcacgccactggaatcattgcgacgacaggatgcccatcaggtgatgtg
caaacgcgtcttcgcctcgggcaatttgaccaagctttggaagccgcagccatgtggcaa
gacatctacggcaaagaaaactacttccttgaactcatggatcacggcctcgagattgag
aatagagtccgctcagagctcctagaaattggccgaaagctcgacttgcccccgttggtg
accaacgactgtcactatgtgctggaatcgcaggctcctgcgcacgaagctatgctgtgc
gtgcaaacaggtaaaaccttgagcgaccccgatcgattcaagttcgacggatcgggctac
tacatcaaaaccgctgagcaaatgcgggaaacgtgggattcactggttccacaagcatgc
gataacacgctatggattgcagagcgtgttcaagactacggcgagatctgggaaccgcat
cctcacgaccgcatgcctattgccgatgttcctgaaggccacaccccaacatcgtggtta
cgacatgaagtccacgaaggattgcgtatgcggtttaacgggggagcagtaccgcagaac
tatctcgagcgcgccgaatttgaaatcgacgttatcgatatgaagggctatccttcctac
ttccttatcgtggctgagctcatcaaacatgcacgttccatcggcattagagtggggcct
ggtcgtggttccgcggctggtgctttggttgcttacgcattgaccatcaccaacatcgat
cctatggagcacggacttctttttgagaggttcttgaacccagagcgtccctctgcacca
gatatcgatattgacttcgacgatcgccgacgcggtgagatgatccgatacgcggctcaa
cgatggggcgaagacaagattgcccaggtgattacgttcggtaccgtgaaaaccaaacag
gcattgaaggactcagcgcgtgtgcaatatggtcaagaaggctacaaaatggccgaccgt
attactaaggaacttccgccagcaatcatggcgaaggatattccattatccggaatcatg
gatccagaacaccctcgatacggcgaggcaggtgaggtgcgtcatctgattgaaactgat
ccagatgtgcgcaagatctacgacaccgctcgtggccttgaaggtgttgtgcgacaagct
ggtgtgcacgcttgtgctgtgattatggccagcgtgccactacttgagcatattcctatg
tggaagcgtgctaacgacggtgccttgatcaccggatggccgtatcctgcatgcgaagcc
atcggtttgctgaagatggacttccttggtctgcgtaacctgaccgtgatcggtgactgc
ctagaaaacatcaagatcaatcgaaatgaagagcttgatcttgaagccctacaaaccgac
gatcccaatgtgtacaagctgctatctagtggcgatacactaggcgtgttccagcttgac
tccggcggcatgcaggaattgctgaagcgtatgcaaccaactggcttcaacgatatcgtg
gcgtctctcgcactgtatcgtccaggtccgatgggtgtgaacgcgcactgggactatgca
gatcgcaaaaatggccgaaagcctattgagccaatccaccccgaactcgaagaaccactc
aaggaaattcttgaagaaacctatggtctgattgtgtatcaagagcagatcatggagatt
tctcgcaagctagcaaactacactgctggcgaagcagatggattccgtaaagccatgggt
aagaagaaacctgaagttcttgccaaggagtataagaagttctctgagggtatgttctcc
aatggttattccaaagcagctgtcgacgcactgtggggaacaattgagccgttcgcatcc
tatgcgtttaacaagtctcacgcggcaggctatgggttggtgtcttattggaccgcatac
cttaaggccaactacaccgcggaatatatggcggcgttgttgacgtcggtggcagataag
aaggacaagtctgcgatctatctttccaactgcaggcatcttgatatttcggtgttgtcg
ccagacgtgaatgaatcccacctaaacttcatgccagttggcgaggacatccgcttcggt
cttggcgcagtgcgtaacgtgggtgaagacgttgtggctgcgatcatcaaagcgcgtgaa
gaaaaaggtgctttcaccgacttttcggattacttagacaagatcgatatcactgcgtgc
aacaagcgtgtgaccgaatccttaattaaggcaggcgcctttgactccatggatcatcct
cgcaaaggattgctgctgatccatgaagatgcggtggatgctgtcaccagtacaaagaaa
gccgccgataaaggtcagtttgatctttttgcaggtcttggcgcagacgccgaagaagtc
aataatgtcttcgccgttcaaattccagatgcacagtgggacagaaagcatcaacttgcg
ctcgagcgtgaaatgcttggtctttatgtctctggccatccgctcgatggctatgaagaa
gcactagaggcgcaaactgataccccattgaccaccattttgagtggtgagctgcgtaat
ggtgcagaagtcaccattggcggaatcatttccggcgtggatcgtcgctactccaagaaa
gacggatctccgtgggcaatcgttaccatggaagaccaccatggtgcacaggtggatctg
cttgtgttcaacaagatctacgccattgtcggtccacagatcgtggaagataacattatt
cttgctaaggcacatgtcagcattcgtgacgatcgaatgtcgctattctgtgacgacctc
aaagttccagaattgggaccaggcaatggtgctggtctaccgctgcgtcttaccctccga
accgatcagtgcactatggaaaatattgccaagctcaaacaggtgctctctaataacaaa
ggagattccgacgtgtacctgaatgtggttcatggagaagaaaaaacagtgatgattttg
ggcgaacacctccgagttaatcgcagtggaaatctcatgggtgacctgaaagccaccatg
gggccgggcattttggggtag
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