Corynebacterium diphtheriae INCA 402: CDB402_2050
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Entry
CDB402_2050 CDS
T01688
Symbol
pks13
Name
(GenBank) polyketide synthase involved in mycolic acid biosynthesis
KO
K12437
polyketide synthase 13
Organism
cdh
Corynebacterium diphtheriae INCA 402
Pathway
cdh00074
Mycolic acid biosynthesis
cdh01100
Metabolic pathways
cdh01110
Biosynthesis of secondary metabolites
Module
cdh_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
cdh00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
CDB402_2050 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cdh01004
]
CDB402_2050 (pks13)
Lipid biosynthesis proteins [BR:
cdh01004
]
Polyketide synthase
Modular PKS
CDB402_2050 (pks13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
Abhydrolase_6
Abhydrolase_1
Abhydrolase_3
CurL-like_PKS_C
Mbeg1-like
RhiE-like_linker
Motif
Other DBs
NCBI-ProteinID:
AEX47339
LinkDB
All DBs
Position
complement(2226684..2231444)
Genome browser
AA seq
1586 aa
AA seq
DB search
MDSRVTAMTTSQLRTWLRDWVLATTGLPAEEITDDKPMQSFGLSSRDVVLLSGELENLLG
VKLDATIAYEYPTIAALSQRLIEGAPEAATPVFTQRETQRTASHDIAIVGMAARYPGAHD
IDQMWSMLIEGRDGITDLPEGRWSEYAADEVTSENIANTDLRGGYLDDIAFFDAEFFGLS
PLEAVNIDPQQRIMLELTWEALEHAHIPASSLKGKPVGVFFGSSNNDYGMLIGADPAESH
PYAMTGNASSIVANRVSYAFDFRGPSVSVDTACSSSLVSVHQAVRALREGDADVAVSGGV
NIMAAPFVSTSFGELGVFSPTGKIHAFSDDADGFVRSDGAGVLVLKRVEDAVADGDTILA
VIKGSAVNSDGHSNGLTAPNPDAQVDVLQRAYADAGIDPRYVDYVEAHGTGTILGDPIEA
TALGKVLGPGRDAATPTLLGSAKTNFGHSESAAGAAGLIKVVLSMMNNTLPASLNFAGPN
RYVDFDAEHLEVVEDPREWPEYSGKKIAGVSGFGFGGTNAHVVLSSYESAADAERRHAPS
LIDPDNPNAVTLEVSGLLPSRRREAAAALADFLEGRPDSDLPKVARSTAKRNHGRSRAVV
TAETTEEAVKRLRTVAEGKTAMGIAVADAPSNAPVFVYSGFGSQHRLMAKKLLGVSEEFA
QRIAELDELVVFEAGWSMLDIITNDEETYTTETAQVTITAIQIALTDLLASFGATPAGVV
GMSMGEIAAAYAAGGLSDRDAMTIAIHRARLMGEGEKSLPEDQLGAMAVVEFSVEALEEF
RQQNPEFSGVEPAVYAAPGMTTVGGPREAVIKLVEKLESEGKFARLLNVKGAGHTSALDP
LLGELAAETSMIEPKPLRIPLYSSVDRATVYPVSSVVHTTDYWLRCTRQSVWFQDATEQA
FAHGAMMLVEISPNPVALMPMMNTAFSVGKSDAQLLFALKRKVDEVASIRDLLAKIYVTG
APISFEYGDGEIIPAPHIPWKRQHYWTSARPSSSNRVAMPGTKVTLPGGALAFTMVADQV
PSTAALIDATVTSVQPGAQVLAISETATLPATGELTTVATPNVGGVAVVVYRVIDGQTQQ
IAEAFATTLSAPHTPVAEAAPDPETGTVVEIEAPDVPDNLLWDPATETVEERLRAIVSEA
MGYDVEDLPRELPLIDLGLDSLMGMRIKNRVEHDFQIPPLQVQTLRDASVADVVALLEEL
VADRGAAQPAETEIAIEHTATAAESHEVGVAPRDASERLVFATWAGITGAAAAGVTSTLP
EITEEQAREIAERLTERAGVAMSAEQVQQAETLEPLANIVREGLETDVEGNIRVLRARPE
GSTQPAVFMFHPAGGSSVVYQPLMRRLPADVPVYGVERREGSLEERAAAYLDEIKQYSDG
LPIILGGWSFGGALAYEVAYQLQDSDVEIATIALLDTVQPAHLAPDTKEETVKRWERYSA
FAKKTYGLDFPVPYELLETAGEDALLAMMAEFLSTTDATEHGLSAGVLEHQRASFVDNRI
LDRMDMQRWANVKIPVMLFRAERMHDGAIELEPAYAEIEPDGGWSAIVEDLVIIQLSGDH
LAVVDEPEIGKVGVALTNRIEQLQGK
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggattctcgcgtcacggctatgaccacttcgcagctacgcacatggctgcgagattgg
gtcctagccactacaggtttgcccgcggaagaaatcaccgatgataaaccgatgcaatct
tttgggctttcctcccgtgacgtggtgctactttccggggaattagaaaacctcttgggc
gtcaaactcgacgcgaccatcgcttatgagtacccgacgatcgcggcgctgagccagcgt
ctgatcgagggtgctcctgaggcggccacccctgtctttacacagcgggaaactcagcgc
accgcgtcccatgacatcgctatcgtgggtatggctgcccgttaccctggcgcacatgac
atcgatcaaatgtggtcgatgctcattgagggccgcgacggtatcaccgacctgccggag
ggccgttggtcggaatatgctgctgacgaggtcaccagcgaaaacatagctaataccgat
ttacggggcggctacttagacgacattgctttctttgatgcagagttctttggactatct
ccgctggaagcagtcaatatcgatccgcagcagcgcatcatgttggagctgacatgggag
gctcttgagcacgcgcacattccggcatcctcgcttaagggcaagccggtgggtgtgttc
ttcggttcttccaataacgactacggtatgttgatcggtgctgatccagccgagtcgcac
ccctatgcgatgacgggtaatgccagctcgattgtggctaaccgtgtgtcctatgccttc
gacttccgtggcccgtcggtaagcgtggatacggcgtgctcctcgtcgctggtatcggtc
caccaagcggtgcgtgcactgcgtgagggcgacgctgatgttgctgtctccggtggcgtg
aacatcatggcggcaccattcgtgtctaccagctttggcgaacttggcgtgtttagccca
acgggcaagatccacgcgttttccgacgacgccgatggcttcgtgcgttccgacggcgcc
ggcgtgctcgtgctcaagcgcgttgaggacgcggtcgccgatggcgataccatccttgct
gtgattaagggctccgcggtgaactccgacggacactccaacggtctgaccgcccctaat
ccagacgcacaggtcgatgtgctgcaacgcgcttacgccgacgctggtattgacccacgc
tacgtggactacgtggaagcacatggaaccggcaccatcttgggtgacccgatcgaagca
accgcactcggtaaggtcctaggccctggccgtgacgcagcaacccctactttgctgggt
tctgctaagaccaactttggtcactccgaatcggctgctggcgctgcgggcctgatcaag
gtcgtgttgtcgatgatgaacaacacgctgccagcgtccctgaatttcgctggtccgaac
cgctacgtcgattttgatgccgagcacctcgaggtcgtggaagatccacgcgaatggcct
gagtattccggcaagaagatcgccggtgtgtccggattcggttttggcggcaccaatgcg
cacgttgtgctgagctcgtatgagtcggcggctgatgcggagcgtcgtcacgctccgagc
ctgatcgacccagacaacccgaatgctgtcacccttgaggtgtcgggattgctgccgtcg
cgacgtcgtgaggcagccgccgcgctggccgacttcctcgaaggtcgccccgacagcgac
ctgcccaaggtggcgcgctcgaccgcaaagcgcaaccatggccgctcccgcgctgtggtc
acagcagaaaccactgaagaggccgtcaaacgcctgcgtaccgttgctgaaggcaagacc
gccatgggtatcgcagttgccgacgcccccagcaacgcacccgtgtttgtttactccggc
tttggctctcagcaccgcttgatggccaagaagctgctgggcgtttccgaggagttcgcg
cagcgtatcgcggagctcgacgagctggtggtttttgaggccggctggtccatgctggac
atcatcaccaacgatgaggaaacctacaccaccgaaaccgcgcaggtcaccatcactgcc
atccagattgcactgacagatctgctggcttcctttggtgccaccccagcgggtgttgtg
ggcatgtcgatgggtgagatcgctgcggcctacgccgccggcggcttgtctgatcgcgat
gcgatgaccattgctatccaccgtgctcgtttgatgggcgagggcgagaagtcactacct
gaggaccagctcggcgctatggccgtggtggaattctccgtggaggcgctggaggagttc
cgtcaacaaaacccagagttcagcggtgtggaaccagccgtgtatgcagcccctggcatg
accactgtgggtggcccacgtgaggccgtgatcaagttggtggaaaaacttgagtcagag
ggcaagtttgcgcgtttgctcaatgtaaagggcgcaggtcacacaagtgctttggatccg
ctgttgggtgagctcgcagctgaaacctcgatgattgagccgaaaccactgcgcattccg
ctgtatagctcggtggatcgcgcgactgtatatcctgtcagttcggtggtgcacaccacc
gattactggttgcgttgtacgcgtcagtcggtgtggttccaagacgcaacagagcaggcg
tttgcgcatggagccatgatgctggtggagatttctccgaatcctgttgcgctgatgccg
atgatgaacaccgcctttagtgttggtaagtcggatgcgcagttgttgtttgcgttgaag
cgcaaggtggacgaggtggcgtcgatacgcgacctgttggccaagatttatgttacgggc
gcgccgatttccttcgagtatggcgatggggagattattcctgcgccgcatattccatgg
aagcgccagcattattggacatctgcgcggccgtcgtcaagcaatcgtgttgcgatgccg
ggcacgaaggttacgctgccaggtggcgcgctggcgtttacgatggtcgccgatcaggtg
ccgtccaccgcagcgcttatcgacgctaccgtcacctccgtacaaccaggcgcgcaggtg
ctcgcgatttctgaaaccgcaacgctgcccgcaaccggtgagctgaccactgttgctacc
ccgaatgttggcggtgtggcagtggtggtttaccgcgtgattgacggtcaaacccagcag
atcgccgaggcatttgccaccacgcttagtgccccgcatactccagtcgctgaggctgct
cctgatccggagacaggcacagtagttgagatagaagccccagatgtgcccgataacctg
ctgtgggatcccgccacggagaccgtggaggaacgcctgcgcgctatcgtttctgaggcc
atgggctacgacgttgaggaccttccccgcgagctgccactgatcgatctgggcttggac
tccctgatgggcatgcgcattaagaaccgtgtggagcatgacttccagattccgccgctg
caggtacaaaccctgcgcgatgcttctgttgcagacgtggttgcccttctggaggaactc
gttgccgaccgtggcgcagcccagcccgccgaaactgaaatcgctatcgagcacactgct
accgccgcggaatcccatgaggtgggcgtggcgccacgtgatgcttccgagcgtttggtc
tttgctacatgggccggtatcacaggggctgcggcagctggggtgaccagcactttgccg
gaaatcactgaggagcaggcacgagaaatcgcagagcgccttacagagcgtgccggtgtt
gcgatgtctgcggagcaggtgcagcaggcggaaacgcttgaacctttggccaacattgtg
cgcgagggattagaaaccgatgtggagggcaacatccgtgtgctgcgtgcccgccctgag
ggctccacgcaaccagctgttttcatgttccacccagctggcggtagttccgtggtgtac
cagccactgatgcgtcggttgcctgcggacgttcctgtctacggtgtggagcgtcgtgaa
ggctcgttagaggaacgcgccgcagcttaccttgatgagatcaagcagtactccgatggc
ctgcccatcattttgggcggttggagcttcggtggcgcgttggcttatgaagtggcttac
cagctgcaggattccgacgtggagatcgcaacgattgctttgctggacaccgtgcagcct
gcgcatttggcgcctgatactaaggaagaaacggttaagcgttgggagcgctactcggca
tttgctaagaagacctatggtcttgatttcccagtgccctatgagctgctggaaaccgct
ggtgaagatgcgctattggcgatgatggcggagttcttgtccaccactgatgctacagag
cacggtttgtcggcgggtgtgctggagcaccagcgtgcttcctttgtagacaaccgcatt
ttggaccgtatggacatgcagcgctgggcaaatgtgaagattccggtgatgttgttccgt
gctgagcgcatgcatgatggggccattgagctggaacccgcgtacgctgagattgagcct
gatggcggatggtcggctatcgttgaagatttggtgatcatccaactatctggcgaccac
ctagcagtggtggatgagccggagatcggtaaggttggtgtggcgctcaccaacaggatt
gaacagctacagggtaagtag
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