KEGG   Corynebacterium diphtheriae INCA 402: CDB402_2149
Entry
CDB402_2149       CDS       T01688                                 
Name
(GenBank) putative DNA repair glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cdh  Corynebacterium diphtheriae INCA 402
Pathway
cdh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cdh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CDB402_2149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdh03400]
    CDB402_2149
Enzymes [BR:cdh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CDB402_2149
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CDB402_2149
DNA repair and recombination proteins [BR:cdh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CDB402_2149
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Auto_anti-p27
Other DBs
NCBI-ProteinID: AEX47438
LinkDB
Position
2345930..2346784
AA seq 284 aa
MPEGHVIHRLADQLNHHFASTQATPDAQPRRPLLVTSPQGRFATEAAQLNGHALDHAEAW
GKHLFLCFDSDNPAHIVHIHLGLIGSMRLEDPANVWGQIRFRIEEPELPTTSAVAANLRG
PQWCRLITEAEMTTATAKLGADPLRDDANFLAIKTKVARSRRSIGSLLMDQKLFAGVGNI
YRAETLFRLGISPFILGKDVAELDLIWQDLRFLMREGVNRGRIDTVRPEHTPEAMGRPPR
KDDHGGEVYVYRRYGQPCYVCGTPILERTMEGRNLFWCPTCQPD
NT seq 855 nt   +upstreamnt  +downstreamnt
atgcccgaaggtcacgtcatccatcgcctcgcagaccaactcaaccatcatttcgccagc
acccaggcaacaccggacgcacaaccccgccgcccgctactggtcacctccccacaaggt
cgctttgctacagaggccgcccaactcaacggtcatgcactcgaccacgccgaggcatgg
ggcaaacaccttttcctgtgttttgatagcgataatcccgcccacatcgtccacatccac
ctcggacttatcggaagcatgcgcttagaagacccagccaatgtgtggggtcagattcga
ttccggatcgaagaaccagaactgcccaccaccagcgcggtagcagcaaacctgcgcggc
cctcagtggtgcaggttgattacggaggcagaaatgaccaccgccaccgcaaagctcggc
gccgatccgctacgcgacgacgccaacttcctagcaatcaaaacaaaagtggcgcgctcg
cgtcgcagtatcggttccctactgatggaccagaaactctttgccggcgtgggcaatatc
taccgtgccgaaacactcttccgcctaggcattagcccctttatcctcggcaaagatgta
gcagagctcgacctcatctggcaggatctacgttttctcatgcgcgagggggtgaacagg
ggtcgaattgatactgttcgcccggagcacacaccggaggcgatggggcggccgccacgc
aaggatgaccacggtggcgaggtgtatgtgtatcgccgctatggtcagccgtgttatgtg
tgcggcacgccgatccttgagcgcacaatggagggtcgcaatcttttttggtgtcctacc
tgccaacctgattag

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