Corynebacterium diphtheriae INCA 402: CDB402_2149
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Entry
CDB402_2149 CDS
T01688
Name
(GenBank) putative DNA repair glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cdh
Corynebacterium diphtheriae INCA 402
Pathway
cdh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDB402_2149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdh03400
]
CDB402_2149
Enzymes [BR:
cdh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CDB402_2149
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDB402_2149
DNA repair and recombination proteins [BR:
cdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDB402_2149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEX47438
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All DBs
Position
2345930..2346784
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AA seq
284 aa
AA seq
DB search
MPEGHVIHRLADQLNHHFASTQATPDAQPRRPLLVTSPQGRFATEAAQLNGHALDHAEAW
GKHLFLCFDSDNPAHIVHIHLGLIGSMRLEDPANVWGQIRFRIEEPELPTTSAVAANLRG
PQWCRLITEAEMTTATAKLGADPLRDDANFLAIKTKVARSRRSIGSLLMDQKLFAGVGNI
YRAETLFRLGISPFILGKDVAELDLIWQDLRFLMREGVNRGRIDTVRPEHTPEAMGRPPR
KDDHGGEVYVYRRYGQPCYVCGTPILERTMEGRNLFWCPTCQPD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggtcacgtcatccatcgcctcgcagaccaactcaaccatcatttcgccagc
acccaggcaacaccggacgcacaaccccgccgcccgctactggtcacctccccacaaggt
cgctttgctacagaggccgcccaactcaacggtcatgcactcgaccacgccgaggcatgg
ggcaaacaccttttcctgtgttttgatagcgataatcccgcccacatcgtccacatccac
ctcggacttatcggaagcatgcgcttagaagacccagccaatgtgtggggtcagattcga
ttccggatcgaagaaccagaactgcccaccaccagcgcggtagcagcaaacctgcgcggc
cctcagtggtgcaggttgattacggaggcagaaatgaccaccgccaccgcaaagctcggc
gccgatccgctacgcgacgacgccaacttcctagcaatcaaaacaaaagtggcgcgctcg
cgtcgcagtatcggttccctactgatggaccagaaactctttgccggcgtgggcaatatc
taccgtgccgaaacactcttccgcctaggcattagcccctttatcctcggcaaagatgta
gcagagctcgacctcatctggcaggatctacgttttctcatgcgcgagggggtgaacagg
ggtcgaattgatactgttcgcccggagcacacaccggaggcgatggggcggccgccacgc
aaggatgaccacggtggcgaggtgtatgtgtatcgccgctatggtcagccgtgttatgtg
tgcggcacgccgatccttgagcgcacaatggagggtcgcaatcttttttggtgtcctacc
tgccaacctgattag
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