Corynebacterium diphtheriae NCTC 13129: DIP0827 Help Entry DIP0827           CDS       T00151                                  Name (GenBank) Putative ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism cdi  Corynebacterium diphtheriae NCTC 13129 Brite KEGG Orthology (KO) [BR:cdi00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cdi03400]     DIP0827 Enzymes [BR:cdi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      DIP0827     5.6.2.6  RNA 3'-5' helicase      DIP0827 DNA repair and recombination proteins [BR:cdi03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     DIP0827 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr Helicase_C WH2_Lhr ResIII DUF6406 AlkZ-like PhoH AAA_25 Motif Other DBs NCBI-ProteinID:  CAE49343 UniProt:  Q6NIF0 LinkDB All DBs Position 799343..804157 Genome browser AA seq 1604 aa AA seqDB search MCETCLIVIMDSSHDFSFADTFALQVATWFSDVFAQPTVVQRQAWAAISAGENALVVAPT GSGKTLAAFLWALNELVQGSGQTALLSRQAAGSAEVEASRAKGVKVVYISPLKALGVDVE NNLRAPLTGINQVAARLGIDQSDITVGVRSGDTPASERSKQVRNPPDILITTPESLYLML TSKARSILTTVDTVIVDEIHAMAGTKRGVHLALSLERLEHLAAQPVQRIGLSATVRPLDV VARFLGGDRPVEVINPPLEKKWQLAVHVPVDDMSDLPTPEPVSEIGEATIDDPLGLTTQP EGFAESALPAQGSMWTFIEQDVFDEVMEHRSTLVFVNSRRTAERLTSRLNELYAQRFQPE ALSPALRRPPAQLMKSIDIAGEATAIIARAHHGSVSKDERALTEKMLKQGELRAVVSTSS LELGIDMGAVDKVIQVESPPSVASGLQRVGRAGHVVGAVSHGSFYPKHRADLVQTAVTVG RMTEGLIEELHVPTNALDVLVQHTVAAVAMDDLDVEDWYATVVRAYPYRDLPREAFDAAI DLTAGVYPSTDFAELRPKVIYDRITGTLSARPGAQRTAVINGGTIPDRGMFGVFLVGSGE SGAPRRVGELDEEMVYESRVGDVFTLGASSWRIEEINKDQVLVTPAPGHTGRLPFWTGDQ AGRPAELGKALGAFRRTLVADPSVVEGMGLDVRARSNVVAFIQQQQESTGVVPDEVTLVL ERFRDELGDWRVVLHSPYGRGVNAAWALVAGAAFSQRTGMDAQPVASDDGIVLRVPESDA EPGADLFEIDPDTVEELVAQQVGNSALFAARFRECAARALLLPSRTPGKRAPLWQQRQRA AQLLDVARKYPSFPIVLETVRECLHDVYDLDALVELAAALKLRKVRIAEVTTQQPSPFAT SILFSYTGAFMYEGDSPLAEKRAAALALDPALLAKLLGTVELRDLLDPTIIAEVDQDVRR RSQRRRAHTAEQLVDALRVLGPVPLTEIPAIAEVDVPAVLQELGRRVMEVRIAGVAHLAL ADDAALLRDALGVPVPPGIPAQVDTITDAVAQLVTRWARARGPFVLSDVQSAFGLAAGVA HGVVDTLHKSGVVTMGRFRAGVDQSEYMAPEVLKIIRQRSLAAARAETQPVSQSALGRFL PQWQQVAAMGQQPQLRGADGVFAVVEQLAGVRLPASAWETMVLPQRVSGYQPSDLDELTA NGEVAVIGAGSAGSSDPWVMLVPTDYAAQLIDAPDVETLSPIQQQIVEILSNGGGYLISS IRDQILGSDTDVRTAIWELFELGMISPDGMAPIRARLSAGSGASSAHRAKRTPARGRLRM GRTRFAQSHQSGIAADMVGRWSLTIPADTDATARSVAHGEAWLDRYGVVTRGSVVAENTL GGFALAYKVLSRFEEAGKAMRGYLIDGLGAAQFSTPAVIDRLRGLGDSDDVTGWPSGTTD PEVYVLAAADPANPYGAALPWPESGPTRAAGSIVVLIDGLLIAHLTRGGRTLTVFDLPTG IEVADVMPMVVSALSEAISRNMMKRIVVEKINGEQVFQSQWVETLRAAGAHIVPQGIRIS AVTQQDTTFHARGRRLSQALSDLEDQQEQHPRLRRGGFQSGGRR NT seq 4815 nt NT seq  +upstreamnt  +downstreamnt gtgtgtgagacgtgtttaatagtgattatggattcctcgcatgatttcagctttgcggat actttcgctctccaagtagcaacctggtttagcgatgtgtttgcccagcccacggtggtg cagcgtcaagcgtgggcggctatttcggcgggggagaatgcgttagtggtagcccccaca ggttcgggtaaaacactcgctgccttcttgtgggcactcaacgagcttgttcaagggtcg ggtcaaacggcgttgctcagtaggcaggctgcaggatcagcagaagtcgaggcatcacgc gccaagggggtcaaggttgtttatatttctccgttgaaggccttgggtgtggatgtggaa aacaatctgcgtgcgcctttgacgggcattaatcaggtggctgctcgcttaggtattgat caaagcgatatcactgtgggtgtgcgctccggagatactccggcgagcgagcgcagcaaa caggtacgtaacccaccagatattttgattaccacgccggagtctttgtatttgatgctg acgtctaaagcacgatctattttgaccaccgttgatacggtgatcgtggatgaaatccac gcgatggcgggcacaaagcgcggggtacatttggccttgagtcttgagcgccttgagcac ctggctgcgcaaccggtgcaacgaattggtctctctgcaacggtacgtcccctcgacgta gtggcgaggtttttgggcggggatcgccctgtggaggttatcaatccgccgttggagaag aagtggcagctagcggtgcatgttcctgtcgatgacatgagtgatttgcccacacccgaa ccagtaagtgagattggggaagccacaatcgacgatccgttggggttgactacccagccg gaaggttttgccgaatccgctcttcccgctcagggctctatgtggacgttcattgaacaa gatgtcttcgatgaggtgatggaacaccgctctaccttggtttttgttaactctcggcgg actgcagagcgcctgaccagcaggcttaatgagctatacgcgcagcgttttcagcccgag gcgttatcgccggcgttacgacgcccacctgcgcagttgatgaaaagtatcgacatcgcc ggcgaagccacagcgattattgcccgtgcacatcatggttcggtgtctaaagacgagcgc gcccttaccgagaaaatgctgaagcaaggtgagctgcgcgctgtggtgtcgaccagttca ctggaactaggtatcgacatgggtgcagtggataaggtcattcaagttgagtcgccaccc tcggtagcctcggggcttcaacgcgtggggcgtgccggtcacgtggtgggtgcggtatcg catggttcgttttatccgaagcatcgcgcagatcttgttcaaaccgccgtcaccgtaggt cggatgaccgaggggcttatcgaggaactccacgttcctactaatgcccttgatgtgctg gttcagcacacggttgctgcggttgctatggatgatcttgatgttgaggattggtacgca acggtggtgcgcgcctatccctatcgcgatcttcctcgtgaggcttttgatgcagctatt gatctcaccgctggggtgtatccctctactgactttgctgagcttcgtccgaaggtcatc tacgaccgtataaccggcactctcagcgcacgccccggcgcgcagcgtactgcggtgatt aatggtgggacgattcccgatcgtggcatgtttggtgtgtttttggtcggtagcggagaa tctggtgcgcctcgcagggtgggtgagcttgatgaggagatggtgtatgagtccagggtg ggggacgtgtttacgttgggggcgtcgagctggcgtattgaggagattaataaggatcag gtgttggttacgcctgcgccggggcatacgggcaggttgccgttttggacgggggatcag gcggggcgtccggcggagttgggtaaggcgttgggggcttttcgacgcaccctagtcgct gatcccagtgtggttgagggcatggggctggatgttcgtgcgcggtcgaatgtggttgcg tttattcagcagcagcaagagtccacgggagtagtacctgatgaggtgacactggtacta gaacggtttcgtgatgaattaggcgattggcgggtggtgcttcattcaccgtatggcagg ggggtgaatgctgcgtgggctttagtagctggtgcggcattttcgcagcgtactggtatg gatgcccagccggttgcctcagatgatggcattgtgttgcgggttccagaatcggatgct gaacctggtgcggatctgtttgagattgatccggacacggttgaggagttggtggcccag caggtgggcaactcagcgcttttcgctgcgcggtttagggaatgtgcggcgcgggcgttg ttgttgccgagtcgcacgccaggtaaacgtgcgccgttgtggcaacaacgacagcgtgct gcgcagttgttggatgtggcacgaaagtacccgagttttcctattgtgttggaaacggtg cgggaatgtttgcatgatgtttatgatcttgatgcgttagtggagctagctgctgcattg aagctgcgtaaggtgcgtatcgctgaggtgacgacgcagcagccgagtccgtttgctacg tctattttgtttagttacacgggcgcttttatgtatgagggcgatagcccgctggcggaa aagcgtgcagctgcgttggccttagacccagcgctgcttgccaaattgttgggcacagta gagcttcgagatttattagatccgacaattatcgctgaggtggatcaagacgtgcggcgg cgttcgcagcgtcggcgtgcacacaccgccgaacagttggttgatgcgcttcgggtttta gggccagttccgctaacagagattcctgcgatcgccgaggtggacgtgcccgctgtgctc caggagctcgggcgccgagtcatggaggtgcgtattgctggagtagcgcatcttgccttg gctgatgatgctgcgttgcttcgggatgcgctaggtgtgccggttccgccggggatccca gcgcaggtcgatacgattactgacgcggtggcacagttggtgactcgttgggctagggca cgtggaccgtttgtactctcagatgttcaaagtgctttcgggttggccgctggggtggca catggggtcgtcgatacgctgcacaagagcggtgtggtgacgatggggcgttttcgggct ggtgttgaccagtcggagtatatggctcctgaggttttaaagatcattcggcagcgttcg ttggcggctgcgcgagccgaaacccagcctgtatcgcagtcggcgctggggcggtttttg ccacagtggcaacaggttgctgcgatgggacagcaaccgcagctgcgcggtgctgatggt gtgtttgcggtggtagagcagctcgccggtgtgcggctgccggcatcggcgtgggaaacg atggtgttgccgcagcgggtgagtggctatcaaccaagtgatcttgatgagctcactgcc aatggagaagtggccgttatcggtgccggaagtgccggtagctcggacccgtgggtgatg ctcgtccccacggactatgcagctcagctgattgatgcgcccgacgtggagactttaagc ccgatccaacaacaaatcgttgagattttaagcaacggtggtggctatttgataagcagc atccgagaccagatacttggcagcgatacagatgtgcgcactgctatctgggagcttttt gagctggggatgataagcccagatggcatggctccgatacgtgcgcgactcagcgctgga agtggggcaagttccgcgcatcgtgcgaagcgcacgccggcccgcgggcggttacgtatg ggccgaacgcgttttgcgcaatcccaccaatcagggatcgccgccgatatggtggggcgg tggtcgctgactatccccgctgataccgatgccactgcgcgctctgttgctcacggagaa gcctggttggatcgctatggggtggtcactcgtggcagcgtggtcgcagaaaacaccttg ggcggatttgctttggcgtacaaggtgctttcacgttttgaggaagctggtaaagccatg cgtggttacctcattgatggtctaggggctgcccagttttctacgccggcggttatcgat cggttgcgcggactaggagatagcgatgatgtgactggttggccatcgggtaccaccgat cctgaggtgtatgttcttgccgcagctgatcccgcgaatccttacggggctgcgttgccg tggcccgaatcgggccccacccgtgcagcgggcagcatcgtcgtgcttatcgacggcctc ctcatcgcccatctcacccgtggcggtcgcacgttgacagtattcgatcttcctaccgga atcgaggtagccgatgtcatgcccatggtggtcagtgcgctttcggaagctatcagccgc aatatgatgaaacgcatcgtggtggaaaaaatcaatggtgagcaggtgtttcagtcgcaa tgggtggagactttgcgtgcagcaggagcccatatcgttccccaaggaatccggatttct gccgttactcagcaagatacgactttccatgcgcgaggtcgcaggctaagccaagcccta agcgatcttgaggatcagcaggagcagcatccacgactgcgccgaggcggattccaatct ggtgggcgacgctag

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