Corynebacterium diphtheriae NCTC 13129: DIP0835
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Entry
DIP0835 CDS
T00151
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdi
Corynebacterium diphtheriae NCTC 13129
Pathway
cdi03420
Nucleotide excision repair
cdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DIP0835 (pcrA)
03430 Mismatch repair
DIP0835 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdi03400
]
DIP0835 (pcrA)
Enzymes [BR:
cdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DIP0835 (pcrA)
DNA repair and recombination proteins [BR:
cdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DIP0835 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DIP0835 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
OstA_2
CarD_TRCF_RID
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAE49351
UniProt:
Q6NIE2
LinkDB
All DBs
Position
811671..814088
Genome browser
AA seq
805 aa
AA seq
DB search
MASQANPFLRQAQPVSQYTGADLTEGLNPQQKAAVEHYGSPLLIVAGAGSGKTSVLTRRI
AYLMRVRGVQPQNILAITFTNKAAAEMRERVSSLVGPVAQRMWVSTFHSTCVRILREQAQ
LVPGLNTNFTIYDSDDSKRLLSMISKDFSLDIKKFTPRLLATGISNLKNELIDADQACAD
AESTKNPYETTIASVFAEYQKRLRASNAVDFDDLIGETVRIFREHPPVTEYYRRRFRHVL
IDEYQDTNHAQYALIHELVGSGPDASELCVVGDSDQSIYAFRGATIRNIEEFERDYPNAE
TILLEQNYRSTQTILNAANSVIAQNENRREKKLWTALGSGDPIVGYVADNEHDEARFIAN
EVDALADKGVAYSDIAVMYRTNNSSRAVEDVFMRTGIPYKVVGGTRFYERKEIRDIIAYL
RLIDNPDDAVSLRRIINTPRRGIGDKAVAFLSLHADNHNVGFHKALLDATEDKVSMLGAR
GRNAVTGFVDMMKGIREEAANKVNEVTGMPDIGDMVSYILDVTGYKAELEKSNDPQDGAR
LDNLNELVSVAREFSSEAANQVAYERMGAENQAPEIPELSEGEAAPGSLMAFLERVSLVA
DADQIPDNEQGVVTLMTLHTAKGLEFPVVFLTGWEDGQFPHLRALGEPKELAEERRLAYV
GITRARRTLYLSRAMLRSSWGNPVTNPPSRFLSEIPDELMDWRREEPEHSYDNSWGMGYG
SSNSRSYGSQNSRSYGSPRTPKLPKHSNKPAIALNVGDRVNHEKYGLGTVTKVDKMAPAD
SVTIDFGSSGTVRLMLIGSVPMEKL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcaagcgaatccgtttctccgccaagctcagcccgtatcgcagtacaccggt
gccgacctcaccgaaggtctgaatccgcagcaaaaagcagcagtggagcattatggatcc
ccgctgctgatcgttgcaggcgctggatctggtaagacatctgtgctgacacggcgaatt
gcctacttgatgcgtgttcgaggtgtacaaccgcagaacatcttggcaattacgtttacc
aataaagcagcagcagagatgcgtgagcgtgtcagctctttggtggggcctgtagcccag
cgcatgtgggtatcgacattccactccacgtgcgtgcgtattttgcgggaacaggcacag
cttgttcctgggcttaacactaatttcacgatctatgactcggatgattccaagcgattg
ttgtccatgatctccaaggatttcagcttggatattaagaagttcacaccacggttgctg
gcaactggaatttctaatcttaaaaatgagctgatcgatgccgaccaagcatgcgctgat
gcggaaagcacgaagaatccctatgagactacgatcgcaagcgttttcgctgaatatcaa
aagagactacgagcgtcgaacgccgtcgattttgatgacctcatcggggagacagtacgg
attttccgtgagcacccgccggttacggaatactatcggcgtaggttccggcacgtgctt
atcgacgagtatcaggacactaaccacgcgcagtatgcattaattcatgagcttgttgga
agtggacctgatgctagcgagttgtgcgtcgttggtgactcggaccagtcaatttatgcg
tttcgtggtgccacaattcgaaatattgaggaattcgaacgcgattaccctaatgctgag
acgattctgcttgagcaaaattaccgttccacccaaacgattcttaatgctgccaattcg
gtgatcgctcaaaatgagaatcgtcgagaaaagaaattatggacagctctaggcagcggt
gatcccattgtcggatatgtcgccgacaacgagcacgatgaagcccgttttattgccaat
gaggtcgacgcgttggctgataaaggggtggcatattccgatattgctgtcatgtatcgt
acgaacaactcttctcgtgctgtagaagacgtctttatgcgaaccggcataccgtacaaa
gtcgtaggcggtacccgcttttatgagcgtaaagagattcgcgacatcattgcttatctt
cgtcttattgataaccccgatgatgcggtgtctttgcgtcgaatcattaatactccacgc
cgaggcattggcgataaagccgtagcatttctgtcactccacgcagataaccacaacgta
ggcttccacaaagcattgctagatgccaccgaagataaagtttccatgcttggcgcacgt
ggccgaaatgctgtcactggattcgttgacatgatgaaggggattcgcgaagaggccgca
aacaaagtcaatgaagtgaccgggatgcctgatatcggagatatggtgtcctacattttg
gacgtcaccggatacaaagccgaattagaaaaaagcaatgatcctcaagatggtgcaagg
ctcgataacctcaacgaactggtatcagttgcccgagaattctcctcagaagctgccaac
caagtagcctatgagcgcatgggggcggagaaccaagccccagagatcccagagttaagc
gaaggcgaagcagcgccaggtagccttatggccttcctagagcgcgtgtcgttggttgct
gatgccgatcagattccagataacgaacaaggcgtcgtcacattaatgacactgcacacc
gcaaagggccttgagttccccgtcgtgttcctcaccggctgggaagacggtcagttcccg
catctgcgtgctctaggagagcctaaggagctagcagaagagcgtcgactagcctatgtc
ggtattacgcgtgcacgccgaaccctctacttgtcccgcgcgatgcttcgatcctcgtgg
ggaaatccagtgaccaaccctccgtcacggttcttatcagaaatacctgatgaactaatg
gattggcgtagagaagaaccagaacactcctatgacaacagctggggtatgggctacggt
tcatctaattcgcgttcttatggatcccagaactctcgttcttatggttctccgcgaact
cccaagttacctaagcattccaacaagccggcaatagcactcaacgttggtgatcgtgta
aaccatgaaaagtatgggcttggcacagtaaccaaggtagacaagatggctcccgcagat
tctgtcaccattgactttgggtcgtcaggaacagtgcggctaatgctgatcgggtcagtg
cctatggaaaagctctag
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