Corynebacterium diphtheriae NCTC 13129: DIP1146
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Entry
DIP1146 CDS
T00151
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cdi
Corynebacterium diphtheriae NCTC 13129
Pathway
cdi03030
DNA replication
cdi03410
Base excision repair
cdi03420
Nucleotide excision repair
cdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DIP1146 (polA)
03410 Base excision repair
DIP1146 (polA)
03420 Nucleotide excision repair
DIP1146 (polA)
03440 Homologous recombination
DIP1146 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdi03032
]
DIP1146 (polA)
03400 DNA repair and recombination proteins [BR:
cdi03400
]
DIP1146 (polA)
Enzymes [BR:
cdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DIP1146 (polA)
DNA replication proteins [BR:
cdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DIP1146 (polA)
DNA repair and recombination proteins [BR:
cdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DIP1146 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DIP1146 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
DUF3383
Motif
Other DBs
NCBI-ProteinID:
CAE49666
UniProt:
Q6NHJ1
LinkDB
All DBs
Position
1129828..1132527
Genome browser
AA seq
899 aa
AA seq
DB search
MLDVLVTLAIVTSNANRLMLIDGHSMAFRAFYALPAENFSTSGGQATNAVYGFLSMLSSL
LVEEKPTHVAVAFDVGRQTFRTEMFPEYKAQREAAPPEFKGQVEIIKEVLETLGITTLEK
ENFEADDIIATLATAAGPLGFDTYIVTGDRDSFQLVNESTTVLYPMRGVSVLHRFTPEAV
EEKYGLTPVQYPDFAALRGDPSDNLPNIPGVGEKTATKWIVQYGNLDSLLAHADEIKGKA
GNSFRERLDQVRMNRTLTEMIKDLELPYAPDQLERKPADASAIASKFDELEFGSNLRDRV
IHAVDAQGNVSEESEEYKPEVVIDHEKLASWLATRAGQSLALYVRGHGSPASGDAESAAI
VDKQFHAVAFDFGDLDADDDQAFAQWIASDSPKYLHEAKAVFHMLAGRGYTLNGIEHDTA
IAGYLLRPGQRTYDLKDVYQRHLQRQLGGGSSESGQLSLLDAPDAQELVDSAVAILELSK
SLTAQLQAIDAYELYREMELPLVGVLARMEATGICVDVATLREQRDIFVEQVKEEESAAR
ELAGDETLNLSSPKQLQVVLFDTLGLPKTKKTKTGYSTAAKEIESLAVKNPHPFLDHLLA
HREFQKMKTTLDGLIKAVGDDGRIHTTFNQTVASTGRLSSTEPNLQNIPVRTPAGRKIRS
AFVVGQGYKSLLTADYSQIEMRVMAHLSEDPGLIEAYQTGEDLHNFVGSKVFDVPVDQVT
PELRRRVKAMSYGLVYGLSAFGLSQQLNIPAGEAKVIMESYFERFGGVKRYLDQVVEQAR
KDGFTSTLFGRRRYLPELSSDNRVARENAERAALNAPIQGTAADIIKIAMLRVDARLTAE
NCQSRVLLQVHDELVLEVASGEQEKVQQLVEEEMDAAISLRVPLEVSAGVGTNWEEAAH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtactcgttacactggccatcgtgacttccaatgcgaaccgactcatgctt
atcgacggccactcgatggccttccgtgcgttctacgcgctgcctgcggagaacttctct
acatcgggcggacaggcgacgaatgccgtttacggatttttgtcgatgttgtcgtctctg
ctcgttgaagaaaagccaacccacgtagcagttgcgttcgacgttggccgccaaacattt
cgaaccgagatgttccctgaatacaaagcgcagcgtgaggctgcgccaccagaattcaag
ggacaggtggaaattattaaagaggtcctagagactttgggaatcaccaccttggaaaaa
gaaaattttgaggcggacgatatcatcgccacgttggctaccgcagcgggtccacttggt
tttgatacgtatatcgttactggtgatcgcgattctttccagctagtaaacgaatcaacc
acggtgctgtatcccatgcgtggtgtatctgttcttcatcgtttcaccccagaagcggtg
gaagaaaaatatggattaactccagtacagtatccagatttcgcggcattgcggggagat
ccttcagataatttgcctaatatcccaggtgttggtgagaaaaccgctacaaagtggatc
gtccaatatggaaatctggattccttgcttgctcatgccgatgagattaagggcaaagct
ggtaatagcttccgagagcgtttagatcaggtgcgtatgaatcgcactttgactgagatg
atcaaggatctcgaacttccttatgctccagatcagctcgagcgcaaacccgctgatgcg
tcggcaattgcatctaagtttgatgaacttgaatttggatcgaatctccgcgatcgagta
atccatgcagttgatgcgcaagggaacgtctctgaagagtctgaagaatacaagcctgaa
gtcgtcatcgaccatgaaaaactagcatcatggcttgccactcgtgctgggcagtcactg
gcattgtatgtgcgaggccatggtagtcccgccagtggtgatgctgagtcggcggcgatc
gtcgataagcaattccatgctgtagcgtttgatttcggtgaccttgacgccgatgacgac
caagcatttgcgcagtggattgctagtgattcgcctaaatacctacatgaagctaaagct
gtatttcatatgctcgcaggcaggggctacactctcaacggcatcgagcatgataccgca
attgcggggtacttattgcgccctggccagcgcacgtatgatctgaaagacgtgtatcag
cgccatttgcaacgtcaactaggcggcggttctagcgagagcggtcaactatcgttgctt
gacgcacctgatgctcaagaacttgttgacagtgctgtagcgattttggagttaagtaaa
tcgcttactgcgcaactacaagctatcgacgcatatgagctctatcgggaaatggagctt
ccgctcgttggcgtgttggcgcgcatggaggcaactggaatttgcgttgatgtggccaca
ttgcgggaacagcgagacatatttgttgagcaggttaaagaagaagaaagcgctgcccgg
gaactcgcgggggacgagactctaaatctgtcgagcccaaagcagcttcaagtagtttta
tttgacacattagggcttcctaagactaagaagaccaagactggatactccacggcagca
aaagaaatagaatcgctggctgttaaaaatccacatccgttccttgatcatctcttggcg
catcgagagttccaaaagatgaaaaccactctagacggcctcattaaagcagtcggagat
gacggtcgtattcacactacgtttaatcaaactgtcgcctcaactggtcgtttgagttca
acggaaccaaacctgcaaaacattcctgtgcgtactccagcaggaaggaaaattcgctct
gcttttgtggtaggacaagggtataagtctctgctgacggcagactattcgcagattgag
atgcgtgtgatggcgcatctttctgaggatccaggtttgattgaggcttatcaaacgggt
gaggacctccacaattttgtgggttcgaaggtcttcgatgtgccagttgatcaagtaact
cctgaactacgtcgccgagttaaagcgatgagctatgggttggtctatgggctttctgca
tttggtctttcccaacaattaaacatccctgctggtgaagccaaagtgatcatggaaagc
tacttcgaacgattcggaggggtaaaacgatatcttgaccaagtggtcgaacaagcccga
aaggatgggttcacatcgactttgtttggccgtcgacgttacttgccggagctttcttcg
gataatcgagtggcacgtgaaaatgccgaacgagctgcattgaatgctccaattcaaggc
acagcagcagacattattaagattgcaatgctgcgtgtcgacgcccgccttactgcagaa
aactgccaatcgagggtgcttcttcaagtccacgacgaattggtgctcgaggtagcttca
ggtgaacaagaaaaggttcaacaacttgtagaagaagaaatggacgccgctatttcactg
cgcgtaccgctggaggtttctgcaggtgtcggtacaaactgggaagaagctgcgcattaa
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