Corynebacterium diphtheriae NCTC 13129: DIP1463
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Entry
DIP1463 CDS
T00151
Name
(GenBank) Conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cdi
Corynebacterium diphtheriae NCTC 13129
Pathway
cdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DIP1463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdi03019
]
DIP1463
Messenger RNA biogenesis [BR:
cdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DIP1463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CAE49991
UniProt:
Q6NGP5
LinkDB
All DBs
Position
complement(1481579..1483633)
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AA seq
684 aa
AA seq
DB search
MTEPRSRARKVTRKAGPPEAAETPVFQAPDSTATAEPADSAVKNSEKAEKDSSAESSRNN
RGRNAQRGGRNRRGNGSSNRSSQSKNNQSNNRGRRTPVKSMQGADLTQRLPEPPKAPKNG
LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIENKLDKVD
ALVITHGHEDHIGAIPWLLKLRPDMPILASKFTMALIAAKCREHRQRPKLIEVNEKSDIN
RGPFNIRFWAVNHSIPDCLGVAIKTGAGLVIHTGDVKLDQTPPDGRPTDLPALSRFGDEG
VDLLLCESTNATVPGFSGSEADVAPTLKRLISDAKQRVILASFASNVYRVQAAVDAAVAA
GRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVVLITTGTQGEPMAAL
SRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVMNMLSQIGATVVTGRDAKVHTSGH
GFAGELLFLYNAARPKNVMPVHGEWRHLRANKELAISTGVEADRVVLAQNGVVVDLVDGR
ARVVGQMQVGHLYVDGVTMGDIDAEVLEERTSLGEGGLIAITAVIDSRTARLLERPTVQA
KGFSEDAVAMMPEVTELVEKTMNDLAAEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMP
TVIPTTSATIDIDDADVRASRESQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacctcgtagccgtgcgcgcaaggttacccgtaaagctggacctccggaagct
gcggagacgccagttttccaagcacctgattctactgcgacggctgagccggcagattct
gccgtaaagaactccgaaaaggctgaaaaagattcttctgcggagtcttcacgaaacaac
cgcggacgcaacgctcagcgcggtggtcgtaatcgtcgtggaaatggttcttctaatcgt
tcttcacaatcgaagaacaaccagtccaacaatagaggacgacgcacccctgtgaaatcg
atgcagggtgcagatcttacgcagaggctgcctgagccacctaaggctccgaagaatggt
ctgcgcatttatgccttgggtggtatttctgagattggtcgtaacatgaccgtcttcgag
tacaacaatcgtttgctgatcgttgactgtggcgttttgttcccgtcatcgggtgagccg
ggagtggacctaattcttccggactttggaccgatcgagaataagctcgacaaagttgat
gctttggtgattactcacggtcacgaagaccacatcggtgcaattccgtggctgcttaag
ttgcgtccggatatgccgattttggcttccaagttcactatggcattgattgctgcaaag
tgccgtgagcatcgtcagcgtccgaagctcattgaagtgaacgagaaatcggatataaac
cgcggtccgttcaacattcgcttctgggcagtcaaccactcgattcctgattgcctcggc
gttgctattaaaactggtgccggattggttattcatactggcgacgtgaagcttgatcag
accccaccagatggtcgcccaaccgatttgcctgcactttctcgcttcggtgatgaggga
gtggatttgcttctttgtgagtcaaccaatgcaactgttccgggattctccggttctgaa
gcagacgtcgctccaactttgaagcgcctgatcagtgatgcaaagcaacgtgttatcttg
gcgtcattcgcatcaaacgtctatcgcgttcaggcagccgttgatgcggctgttgctgcg
ggtcgtaaggtagcgttcaatggacgctccatgattcgaaacatggaaatcgccgagaag
atgggctatttgaaagcacctcgcggcaccattgtcagcatggatgatgcagccaagatg
gcgccgcacaaggttgtactgatcacaactggtacccaaggcgaacctatggcagctttg
tcgcgtatggcacgtcgtgagcatcgacaaatcactgttcgcgatggtgatttgatcatt
ctgtcgtcttcattggttcccggtaacgaagaagcagttttcggtgtaatgaatatgctg
tcccagattggtgcgactgtggtaactggccgtgatgccaaggtccacacctcgggacac
ggattcgccggagagctgttgttcctatacaacgctgctcgtcctaagaacgtcatgccg
gttcacggcgaatggcgacacctgcgggctaacaaggaactggctatttccaccggtgtg
gaagcagaccgagttgtattagctcaaaacggtgttgtagttgaccttgttgatggtcgt
gctcgtgttgttggtcagatgcaggttggacacctttatgttgatggtgtgaccatgggc
gatattgatgctgaagttttggaagagcgtacttccttgggtgaaggcggcttgatcgct
attaccgcagttattgattcgcgtactgctcgattgcttgagcgtccgacagtccaagcc
aagggattctctgaagacgcagtagcgatgatgccagaggtaactgagctggttgaaaag
acgatgaacgatctggctgcagaaggcgaaaatgatccatatcgtatggttcagcagttg
cgccgtcgtgtttcacgattcgtcgagcagaagtggcgtcgtaagccaatgattatgcca
acggtcatcccgactacatcagcgaccatcgatatcgatgacgctgatgtgcgtgcgagc
cgcgaaagtcagtag
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