Corynebacterium diphtheriae NCTC 13129: DIP1543
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Entry
DIP1543 CDS
T00151
Name
(GenBank) Putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cdi
Corynebacterium diphtheriae NCTC 13129
Pathway
cdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DIP1543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdi03400
]
DIP1543
Enzymes [BR:
cdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DIP1543
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DIP1543
DNA repair and recombination proteins [BR:
cdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DIP1543
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
AC_1
Motif
Other DBs
NCBI-ProteinID:
CAE50068
UniProt:
Q6NGH4
LinkDB
All DBs
Position
complement(1569776..1570666)
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVEVVRRGLTPYVLGATITDVAVEHPRSIRTIEGGAAELIGSLQGREVTRIGRRG
KFLWFELTGHGDYACGFPQQGLLVHLGMSGQMLIKTQNSALHPHRRIRTTIVRSDAQECF
ELWFVDQRTFGYWAPTTFVETAHGCVPEQITHIARDLLDPQLKRENLARLIRKKNSEIKR
VLLNQEIVSGIGNIYADEMLWAARIHPQTPASHLSVAQLSNLLEHGQRVMNAALDQGGTS
FDSLYVNVNGQSGYFDVSLHAYGQQGQACDRCGSNIIREKFANRSSHFCPRCQLMH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcctgaagttgaggttgtacgtcgcgggctaacaccttatgtgcttggc
gcaactatcactgatgttgccgttgagcacccccgcagcattaggacaatcgaaggcggg
gccgccgaactcatagggtcgctacaaggtcgtgaggtcacgcgcataggtcgccgtggc
aaatttttgtggtttgagctcacaggccatggtgattatgcatgcggatttcctcagcaa
gggctactggttcatttgggaatgagcggtcaaatgctgataaaaactcaaaactcggct
ctgcatcctcatcgtagaattcgtaccacgattgttcgctcagatgctcaggaatgcttc
gagctttggtttgtcgatcagcgcacttttggctattgggcacccaccacatttgtagaa
actgctcacggttgcgttccagaacagatcactcacatagcgcgtgatcttttggaccct
caactcaaaagagaaaatctagcgcgattgatccgcaagaaaaatagtgagattaaaaga
gttctgcttaaccaagaaattgtctctggaataggcaatatttacgccgatgagatgttg
tgggctgcacgaatccatccacaaactcctgcgtcgcatttgtctgtcgcacaattaagt
aatttgctcgaacacggtcagcgagtcatgaacgcggctttagaccaaggtggaactagc
ttcgattctctttatgttaacgtcaatggccaatcggggtattttgatgtatcgcttcat
gcatacggccagcaaggccaagcgtgcgatcgctgtggttcgaatattatccgcgaaaag
tttgctaaccgctcgagtcatttttgcccacgttgtcagcttatgcactag
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