Corynebacterium diphtheriae NCTC 13129: DIP1580
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Entry
DIP1580 CDS
T00151
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cdi
Corynebacterium diphtheriae NCTC 13129
Pathway
cdi03030
DNA replication
cdi03430
Mismatch repair
cdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DIP1580 (dnaE)
03430 Mismatch repair
DIP1580 (dnaE)
03440 Homologous recombination
DIP1580 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdi03032
]
DIP1580 (dnaE)
03400 DNA repair and recombination proteins [BR:
cdi03400
]
DIP1580 (dnaE)
Enzymes [BR:
cdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DIP1580 (dnaE)
DNA replication proteins [BR:
cdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DIP1580 (dnaE)
DNA repair and recombination proteins [BR:
cdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DIP1580 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CAE50105
UniProt:
Q6NGE6
LinkDB
All DBs
Position
complement(1606336..1609896)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAKKSSFVHLHNHTEYSMLDGMAKVDMLAEEVVRQGMPAVGMTDHGNMFGSDAFYRAMKA
AGVKPIIGIEAYMAPGSRLHKERVRWGEPHQKSDDVSASGAYLHQTMLAENVEGLHNLFY
LSSMASYEGQLGKWPRMDAELIAEHATGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGKENYFLELMDHGLEIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLC
VQTGKTLSDPDRFKFDGSGYYIKTAEQMRETWDSLVPQACDNTLWIAERVQDYGEIWEPH
PHDRMPIADVPEGHTPTSWLRHEVHEGLRMRFNGGAVPQNYLERAEFEIDVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYAAQRWGEDKIAQVITFGTVKTKQALKDSARVQYGQEGYKMADR
ITKELPPAIMAKDIPLSGIMDPEHPRYGEAGEVRHLIETDPDVRKIYDTARGLEGVVRQA
GVHACAVIMASVPLLEHIPMWKRANDGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDC
LENIKINRNEELDLEALQTDDPNVYKLLSSGDTLGVFQLDSGGMQELLKRMQPTGFNDIV
ASLALYRPGPMGVNAHWDYADRKNGRKPIEPIHPELEEPLKEILEETYGLIVYQEQIMEI
SRKLANYTAGEADGFRKAMGKKKPEVLAKEYKKFSEGMFSNGYSKAAVDALWGTIEPFAS
YAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKDKSAIYLSNCRHLDISVLS
PDVNESHLNFMPVGEDIRFGLGAVRNVGEDVVAAIIKAREEKGAFTDFSDYLDKIDITAC
NKRVTESLIKAGAFDSMDHPRKGLLLIHEDAVDAVTSTKKAADKGQFDLFAGLGADAEEV
NNVFAVQIPDAQWDKKHQLALEREMLGLYVSGHPLDGYEEALEAQTDTPLTTILSGELRN
GAEVTIGGIISGVDRRYSKKDGSPWAIVTVEDHHGAQVDLLVFNKIYAIVGPQIVEDNII
LAKAHVSIRDDRMSLFCDDLKVPELGPGNGAGLPLRLTLRTDQCTMENIAKLKQVLSNNK
GDSDVYLNVVHGEEKTVMILGEHLRVNRSGNLMGDLKATMGPGILG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaatcttcctttgttcacttacataatcacaccgagtattcgatgctcgac
ggaatggcaaaagtggacatgttggcagaagaagttgtcaggcagggcatgcctgcagta
ggtatgaccgatcatggaaacatgtttggatccgatgcattttatcgggcaatgaaagct
gccggggtaaaaccgatcatcggtatcgaagcctatatggcacctggatcacgcttgcac
aaggaacgtgtgcgctggggtgaaccccatcaaaaatccgacgacgtctcagcatctggt
gcctatctccaccaaaccatgctggccgaaaacgttgaagggcttcacaatcttttctac
ttgtcttcgatggcatcgtatgaaggccaattaggtaaatggcctcgaatggatgccgag
ctgatcgcagagcacgccactggaatcattgcgacgacaggatgcccatcaggtgatgtg
caaacgcgtcttcgcctcgggcaatttgaccaagctttggaagctgcagccatgtggcaa
gacatctacggcaaagaaaactacttccttgaactcatggatcacggcctcgagattgag
aatagagtccgctcagagctcctagaaattggccgaaagctcgacttgcccccgttggtg
accaacgactgtcactatgtgctggaatcgcaggctcctgcgcacgaagctatgctgtgc
gtgcaaacaggtaaaaccttgagcgaccccgatcgattcaagttcgacggatcgggctac
tacatcaaaaccgctgagcaaatgcgggaaacgtgggattcactggttccacaagcatgc
gataacacgctatggattgcagagcgtgttcaagactacggcgagatctgggaaccacat
cctcacgaccgcatgcctattgccgatgttcctgaaggccacaccccaacatcgtggttg
cgacatgaagtccacgaaggattgcgtatgcggtttaacgggggagcagtaccgcagaac
tatctcgagcgcgctgaatttgaaatcgacgttatcgatatgaagggctatccttcctac
ttccttatcgtggctgagctcatcaaacatgcacgttccattggcattagagtgggccct
ggtcgtggttccgcggctggtgcattggttgcttacgcattgaccatcaccaacatcgat
ccaatggagcatggccttctttttgagaggttcttgaacccagagcgtccctctgcacca
gatatcgatattgacttcgacgatcgccgacgcggtgagatgatccgatacgcggctcaa
cgatggggcgaagacaagattgcccaagtgattacgttcggtaccgtgaaaaccaaacag
gcgttgaaggactcagcgcgtgtgcaatatggtcaagaaggctacaaaatggccgaccgt
attactaaggaacttccgccagcaatcatggcgaaggatattccattatccggaatcatg
gatccagaacaccctcgatacggcgaggcaggtgaggtgcgtcatctgattgaaactgat
ccagatgtgcgcaagatctacgacaccgctcgtggccttgaaggtgttgtgcgacaagct
ggtgtgcacgcttgtgctgtgattatggccagcgtgccgctacttgagcatattcctatg
tggaagcgtgctaacgacggtgccttgatcaccggatggccgtatcctgcatgcgaagcc
atcggtttgctgaagatggacttccttggtctgcgtaacctgaccgtgatcggtgactgt
ctagaaaacatcaagatcaatcgaaatgaagagcttgatcttgaagccctacaaaccgac
gatcccaatgtgtacaagctgctatctagtggcgataccctaggcgtgttccagcttgac
tccggcggcatgcaggaattgctgaagcgtatgcaaccaaccggcttcaacgatatcgtg
gcgtctctcgcactgtatcgtccaggtccgatgggtgtgaacgcgcactgggactatgca
gatcgcaaaaatggccgaaagcctattgaaccaatccaccccgaactcgaagaaccactc
aaggaaattcttgaagaaacctatggtctgattgtgtatcaagagcagatcatggagatt
tctcgcaagctagccaactacactgctggcgaagcagatggattccgtaaagccatgggt
aagaagaaacctgaagttcttgccaaggagtataagaagttctctgagggtatgttctcc
aatggttattctaaagcagctgtcgacgcactgtggggaacaattgagccgttcgcatcc
tatgcgtttaacaagtctcacgcggcaggctatgggttggtgtcttattggaccgcctac
cttaaagctaactacaccgcggaatatatggcggcgttgttgacgtcggtggcagataag
aaggacaagtctgcgatctatctttccaactgcaggcatcttgatatttcggtgttgtcg
ccagacgtgaatgaatcccaccttaacttcatgccagttggcgaggacatccgcttcggt
cttggcgcagtgcgtaacgtgggtgaagacgttgtggctgcgatcatcaaagcgcgtgaa
gaaaaaggtgctttcaccgatttttcggattacttagacaagatcgatatcactgcgtgc
aacaagcgtgtgaccgaatccttaattaaggcaggcgcctttgactctatggatcatcct
cgcaaaggattgctgctgatccatgaggatgcagtggatgctgtcaccagtacaaagaaa
gccgccgataaaggccagttcgatctttttgcaggtcttggcgcagacgccgaagaagtc
aataatgtcttcgccgttcaaattccagatgcacagtgggacaaaaagcatcaacttgcg
cttgagcgtgaaatgcttggtctttatgtctctggccatccacttgatggctatgaagaa
gcactggaggcgcaaactgataccccattgaccaccattttgagtggtgagctgcgtaat
ggtgcagaagtcaccattggcggaatcatttccggcgtggatcgtcgctactccaagaaa
gacggatctccgtgggcaatcgttaccgtggaagaccaccatggtgcacaggtggatctg
cttgtgttcaacaagatctacgccattgtcggtccgcagatcgtggaagataacattatt
cttgctaaggcacatgtcagcattcgtgacgatcgaatgtcgctattctgtgacgacctc
aaagttccagaattgggaccaggcaatggtgctggtctaccgctgcgtcttaccctccga
accgatcagtgcactatggaaaatattgccaagctcaaacaggtgctctctaataacaaa
ggagattccgacgtgtacctgaatgtggttcatggagaagaaaaaacagtgatgattttg
ggcgaacacctccgagttaatcgcagtggaaatctcatgggtgacctgaaagccaccatg
gggccgggcattttggggtag
DBGET
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