Corynebacterium diphtheriae NCTC 13129: DIP1612
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Entry
DIP1612 CDS
T00151
Name
(GenBank) Putative geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cdi
Corynebacterium diphtheriae NCTC 13129
Pathway
cdi00900
Terpenoid backbone biosynthesis
cdi01100
Metabolic pathways
cdi01110
Biosynthesis of secondary metabolites
Module
cdi_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cdi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
DIP1612
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
DIP1612
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cdi01006
]
DIP1612
Enzymes [BR:
cdi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
DIP1612
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
DIP1612
2.5.1.29 geranylgeranyl diphosphate synthase
DIP1612
Prenyltransferases [BR:
cdi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
DIP1612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAE50137
UniProt:
Q6NGB5
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All DBs
Position
1643980..1645104
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AA seq
374 aa
AA seq
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MSTHPAGISACHHSLPSFSEVPAAVEEVLAEFFEGRKRKVAKIGVPVSNAVELLVEYVLG
GGKRIRPTYAWAGFVASGGLTNKTEDPGAVLTAIGSLELIQACALIHDDIIDASDTRRGN
PTVHRVAERTHAESHRLGDSARFGESIAILVGDLAMVWADDMFHNSGLSDAAIRRASNAW
RGMRTEVIGGQLLDIYIESTGSESIELAETVNRFKTAAYTIERPLHIGAALAGADDQTVH
CLRNYGRDIGLAFQLRDDLLGVFGDPSVTGKPAGDDLREGKRTVLVAKALEILESAGSIH
EAEMIRRDLGAVSGAEDIAQLASIIRSSGAADAVEERIATLRTSGLAHISNDVIDAEAQD
FLKHLAIKATSRSF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacgcaccccgccggtatctctgcatgccatcactcactgccttcgttttcggag
gtcccagcagcagtagaagaagtactcgcggagtttttcgaaggccgtaaacgcaaggta
gccaagattggtgttccagtgagcaatgcggttgagctgctggtcgaatatgtccttggc
ggtggaaaacggattcgtcctacgtatgcgtgggcgggttttgttgctagtggcggatta
actaataagacggaagatcccggcgcggtactcacagcaattggctctctggaactgatc
caagcgtgtgcgcttatccacgacgacattatcgacgcttccgatacgaggcgtggtaat
ccgactgtgcaccgtgttgcagaacgcacccatgcagaatcccatcgcttgggcgattcc
gcacgttttggcgagtcgatcgcaattttggttggcgatcttgcgatggtgtgggcagat
gatatgttccataactctgggcttagtgatgctgcaattcgtcgtgcttcgaatgcgtgg
cgtggcatgcgcactgaagttattggcggacaacttcttgatatttacattgaatccact
ggtagcgagagcatcgaactagcggaaaccgtcaatcgttttaaaactgccgcctatacg
attgagcgccctcttcacattggtgcggcgttggcgggcgctgatgaccagacagttcac
tgtctacgaaattatggccgtgatatcggcttggcgttccagcttcgcgacgatctttta
ggtgtatttggtgacccaagtgttacgggtaagccagctggcgatgacttgcgtgaagga
aagcgcacggtattggtggccaaagcattagaaatcttggagtctgcgggctcgatccac
gaggcggaaatgattcgtcgtgacttaggtgcagtgtcgggggccgaagatattgcacaa
ttggcttcgattattcgctcctctggtgccgccgatgcggtggaagagcgcatcgcaacc
ttgcgaacttctggccttgcgcacattagcaatgatgttattgatgcagaggcccaagat
tttctaaaacacctagctatcaaggctacgtcgagaagcttctaa
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