Caldicellulosiruptor diazotrophicus: CaldiYA01_00470
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Entry
CaldiYA01_00470 CDS
T08057
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CaldiYA01_00470
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cdia01001
]
CaldiYA01_00470
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cdia02022
]
CaldiYA01_00470
Enzymes [BR:
cdia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CaldiYA01_00470
Protein kinases [BR:
cdia01001
]
Histidine kinases
OmpR family
CaldiYA01_00470
Two-component system [BR:
cdia02022
]
OmpR family
VicK-VicR (cell wall metabolism)
CaldiYA01_00470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_3
HATPase_c_2
HATPase_c_5
PAS
PAS_8
CusS
ChapFlgA
Borrelia_P13
GAT
Motif
Other DBs
NCBI-ProteinID:
BCS80087
LinkDB
All DBs
Position
52051..53751
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AA seq
566 aa
AA seq
DB search
MTRSIESRLILVFGLLILMVMFISSFFIIDRTKNYFYEDVQKKIEFMVNSSLIRLLEDKN
LPQQKIQTIVDQSMKESQYGFMIQKLIVTDSRGKVLASFPRMDISFFPSDEILTSLAGYK
VVKQEVEDQAMVFAFPIKSGRSVERALYLEVSVQNILATVTDIKNILLMAYIVAMIFSLF
IGFLFAKTLSNPLRKLTKQALEMAEGNLDVKIEISSQDEIGKLASAFKVMATNVKKYISE
LEFEKQKLERILQNMSDGVLAVNSKNEIIHINESAKKFLKGDVERFLVHVQSDKNKDFTQ
NIYEVDGWTIEINTATFIDSYQGTGTIFILHDITQQAKLDRMRKQFVADVSHELRTPITT
IKTYSETLLDVDDEAVKREFLGVVIKECDRMTRLISDLLYLSRLDSGENILKVEEINVSE
LVRFVCEKMRIHAKKKNQSLLCCAEENVVITADRDRLEQVLINLINNAIVYVQEGGQIEV
KLEKNEEHVKITVKDNGPGIPEDDLPRIFERFYRVDKARSRSLGGSGLGLSIADEIVKAH
GGRILVDSKEGVGTTFTVVLPVKRSV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaagcatagaaagcaggctcatacttgtttttggacttttaattttgatggtt
atgtttatatcaagttttttcatcatagacaggacaaaaaactacttttatgaagatgtc
cagaaaaagattgagtttatggtaaactcatcactcatcaggcttttagaggataaaaac
ctgccgcagcagaaaatccaaactatcgttgaccagtcgatgaaagaaagtcagtacggg
tttatgattcaaaaacttattgtgacagatagcagagggaaggttcttgcatctttcccg
aggatggatattagctttttcccgtcagatgagattttgacaagccttgcgggctacaag
gttgtaaagcaggaagtagaggaccaggcgatggtttttgcattcccgataaaaagtggc
aggtcggtagaaagggcactgtatttggaggtatctgttcagaatattcttgcaactgtg
actgacatcaaaaacatacttctgatggcttatattgttgccatgatattttcactcttt
attggttttctatttgcaaagactctttcaaacccactcagaaaacttaccaagcaggca
cttgagatggcagaaggaaatcttgatgtgaagattgaaatttcaagccaggatgagatt
ggtaagcttgcaagtgcttttaaggtcatggcgacaaatgtaaaaaaatatatatcagaa
cttgaatttgaaaagcaaaagcttgaaagaattcttcagaacatgtcggatggagttttg
gctgtaaactctaaaaatgaaatcattcatatcaatgagagtgcaaaaaagtttttgaaa
ggtgatgttgaaaggtttttagtacatgttcaaagtgacaaaaataaggactttacccag
aacatatatgaagttgatggatggacgattgagatcaatacagcaacttttatagattca
taccaaggtactggtacaatatttatccttcacgatataactcagcaggcaaaacttgat
agaatgcgaaaacagtttgttgcagatgtgtctcatgagcttagaactccaatcacaacc
atcaagacatattctgaaactcttttggatgttgatgatgaggctgtgaaaagagagttt
ttgggtgtggtcataaaagagtgtgataggatgacaaggcttatttctgatcttttgtat
ctttctcgacttgacagtggggagaatattttaaaggttgaagagataaatgttagtgaa
cttgtaaggtttgtatgtgaaaagatgaggattcatgcaaagaagaaaaaccagagtctt
ttatgttgtgcagaagagaacgtggtaattacagccgatagagacaggcttgaacaggtg
ctgataaatcttataaacaacgccattgtctatgttcaagaaggcgggcaaatagaggtt
aagcttgaaaagaatgaggagcatgttaagataactgtaaaggacaacgggccaggaatt
cctgaagatgatcttccgcgtatatttgaaaggttttacagggttgacaaggcaaggtcg
cgaagccttggcggtagcgggcttggtctttcgattgctgatgagattgtaaaggcacac
ggcgggagaattttggttgatagcaaagaaggggttggtacaacctttactgttgtgctt
ccggtaaaaagaagtgtgtaa
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