Anaerocellum diazotrophicum: CaldiYA01_04110
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Entry
CaldiYA01_04110 CDS
T08057
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cdia
Anaerocellum diazotrophicum
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdia03032
]
CaldiYA01_04110 (topA)
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_04110 (topA)
Enzymes [BR:
cdia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CaldiYA01_04110 (topA)
DNA replication proteins [BR:
cdia03032
]
Prokaryotic type
DNA Topoisomerases
CaldiYA01_04110 (topA)
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CaldiYA01_04110 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
HypA
Toprim_4
Ribosomal_aS21
DUF1936
Auto_anti-p27
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
BCS80451
UniProt:
A0ABM7NK21
LinkDB
All DBs
Position
468151..470214
Genome browser
AA seq
687 aa
AA seq
DB search
MKKLVIVESPAKAKTIAKYLGKEFKVEASMGHVRDLPKSDLGVDIENGFAPKYINIRGKA
DVINRLKKSAQEAEKVYLATDPDREGEAISWHLATILGLDTNDNVRITFNEITKKAVQES
LKNARPIDHNLVNAQQARRVLDRLVGYKLSPFLWEKVKGGLSAGRVQSVATRLVVEREEE
IENFKPEEYWTLEAVFKKDAQEFKAKFYGDKKGKIELKNQGQVQEIEEKIKNKEFKVVKI
KVSEKKKNPPPPFITSTLQQEASRKLRFTPAKTMAVAQMLYEGVEIKGEGSVGLITYMRT
DSTRVSEEAQQAARNLILQKFGREYLPEKPRVYKTKKDAQDAHEAIRPTYLEMDPESIKD
SLTPDQYKLYKLIYDRFLASQMESSIYEALSAELEVEGYIFKLTGSKLKFAGFMEVYVEG
KDTEDEEEENQLPEISEGEVLKPIKLENKQHFTQPPSRYTEATLIKALEEKGIGRPSTYA
PTIQTILERGYVVKEDRFLKPTELGKLVTNILKEYFKDIIDIEFTAELESNLDKIEEGKL
EWTEVVKKYYQPLEKELEIARATLLKVKVEDEETDIVCENCGRKMVIKKGRYGKFLACPG
YPECKNTKPYYDYLDVLCPKCGKRVIEKKSKKGKRYYTCEGYPDCDLILWEKPAKNCPKC
GSLMFEKGRKGNKKIICSNESCAYEEK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaactggtcattgttgagtcacctgcaaaggcaaaaacaattgcgaagtatctt
ggcaaagaatttaaggtagaagcttcaatgggacatgttagagaccttcccaaaagtgat
ttgggtgttgacatagaaaatggttttgcccctaagtatataaacattagaggtaaagca
gatgtaataaacaggctaaaaaaatctgcacaagaagcagaaaaagtttaccttgcaaca
gaccccgacagggaaggcgaggcaatctcatggcatttagcaactattttagggcttgat
acaaatgataatgtaagaattacattcaacgagataaccaaaaaagctgtccaagaatct
ttaaaaaacgcaaggcctattgaccataacttagttaatgcccagcaagccagaagagtt
ttagacagacttgttggatacaagctaagtccatttttgtgggagaaagtcaaaggtgga
ctttctgcaggaagagtgcagtctgttgcaacaaggcttgtggttgaaagggaagaggag
atagaaaattttaagcctgaagaatactggacattagaagcggtatttaaaaaagatgcc
caagagtttaaagcaaagttctatggagataagaaagggaagatagagctaaaaaaccaa
ggtcaggtccaagagattgaagaaaagataaaaaacaaggagttcaaggttgtaaagata
aaggtatcggagaaaaagaaaaatccgcctccgccttttatcacaagcacacttcagcag
gaggcatcaagaaaactgaggtttactcctgcaaagacaatggcggttgcgcagatgctg
tatgaaggcgttgagataaaaggagaaggaagtgttggacttataacatacatgagaaca
gattctacaagggtttctgaggaggcacagcaggcggcaagaaaccttatcctacagaag
tttggtagagaatatcttcccgaaaagccgagggtttacaaaacaaaaaaagatgcgcaa
gatgctcatgaggctataagacccacctacttagagatggaccctgagagtataaaagat
tctctgacacctgaccagtacaagttgtataaactcatttatgacaggtttttggcatcg
cagatggaaagcagtatttatgaggctctgtcagccgagcttgaagtggaaggctatatt
tttaagctcacagggtcaaaactcaagtttgcagggtttatggaagtatatgttgaaggc
aaggatacagaagatgaagaagaggagaatcagcttccagaaattagtgaaggagaggtt
ttaaagcccataaaacttgagaacaaacagcattttactcaaccgccttctcgctatact
gaagctaccttaataaaagctttagaagaaaaagggataggaagaccgagcacgtacgct
ccaacaatccagacaattctggagagaggatatgttgtcaaagaagacaggtttttaaaa
ccaacagagcttggtaaacttgtaacaaatatacttaaagaatatttcaaagacataata
gacattgaatttactgcagaacttgagagcaatcttgacaagattgaggaaggaaagctt
gagtggactgaggttgtaaaaaaatactaccagccacttgaaaaggaacttgagatagca
cgagctactttgctaaaggttaaggttgaggatgaggagacagacattgtatgcgaaaac
tgtggaagaaaaatggtgataaaaaaaggcagatacgggaagtttttggcatgtccagga
tatcctgaatgcaaaaacacaaaaccttattacgattaccttgatgtgttgtgtccaaag
tgcggcaaaagggtaatagaaaaaaagtccaaaaaaggcaagagatattacacgtgcgaa
ggatatcctgactgtgacctcattttatgggaaaagccagccaaaaactgtccaaagtgt
ggcagtctcatgtttgaaaagggaagaaaagggaataaaaagattatatgttcaaatgag
agttgtgcttacgaagaaaaatag
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