Caldicellulosiruptor diazotrophicus: CaldiYA01_04970
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Entry
CaldiYA01_04970 CDS
T08057
Symbol
lipO
Name
(GenBank) lipoprotein LipO
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CaldiYA01_04970 (lipO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdia02000
]
CaldiYA01_04970 (lipO)
Transporters [BR:
cdia02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
CaldiYA01_04970 (lipO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
BCS80537
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Position
548347..549912
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AA seq
521 aa
AA seq
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MSKVKKILRLFVVSICIVGLLLTSIGVLGASKSKYSFKLTIMAQYFGTEPAPSNSPVILK
AEQYLKTDLEFTWVPADGYNDKLNIMLASGNLPMVVYVGGKTASIIGACKAGAFWELGPY
IKQYKNLKTIPDIVLWNSSIDGKIYGIPRSRTLGRNGIVYRKDWAKNVGITKLETIDDLY
NMLKKFTYNDPDKNGKNDTYGMIVCNYNGPFYITLTWFGGPNGWGLNKNGQLVPSFLTNA
YLENLKFWRKMYQEKLFNHDFPSVPGARWEDYYSQGKGGVKIDVIDSANRIYNGLKNNGI
IPKDAKDTDIMDIVVSVKGKYGLRNMPTSGYSGYLMVSKTSVKDMNTFKKVMSILDKFGD
RTIQDLFGYGLPNRHYKLVDGKIDPIPNLPADLSREISGLNQVLHFYPANGGTPRYMTPL
LQLQADMQALNEKLNILVPNPAEALIGMSDTYIKRGVTLDNMIEDARVKYITGQLNDQGF
KKVLDNWRKQGGDQIIKEVNALYRKYKKNIPYKEDLYKILN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagttaagaagattttgaggttatttgtagttagcatctgtattgtaggttta
ttgttaacatcaattggagtattgggtgcatcaaaatcaaagtattcgtttaaactcacg
atcatggctcagtattttgggacagaacctgcgccttcaaacagtccagttattttaaaa
gcagagcagtacttaaaaactgacctggagtttacatgggtacctgctgatggttacaat
gacaaattaaacattatgttagcaagtggaaatcttccaatggtggtttatgttggaggt
aagactgcatctataattggtgcttgcaaagcaggagcattctgggaacttgggccgtat
ataaagcaatataagaatttgaaaacaattccagatatagttctttggaactcatcaatt
gatggtaaaatatatggtataccgcgatcaagaactttaggaagaaatggaattgtatat
agaaaagattgggctaaaaatgttgggattactaaacttgaaactattgatgatttgtac
aacatgttaaagaagtttacttacaatgatccagataaaaatggaaaaaatgacacatat
ggaatgattgtttgcaactacaatggaccattctatattactctcacatggtttggtggt
ccgaatggatgggggttgaacaaaaacggacagttagttccgtctttcttaacaaatgca
tatcttgaaaatttaaaattctggcgaaagatgtatcaggaaaagctgtttaaccatgac
ttcccaagtgttccaggtgcaagatgggaagattattactcacagggtaaaggtggagta
aaaattgacgttatagactctgcaaacagaatttacaatggcctcaagaacaacggtatc
attccaaaagatgcaaaagatacggatataatggacattgttgtgtctgtcaaaggtaaa
tacggcctaagaaatatgccgacttctggttactcaggatatttaatggtttcaaagaca
agtgtaaaagatatgaatacattcaagaaagtaatgtcgatattagataaatttggtgac
agaacaatacaggacttgtttggttatggactgccaaacagacactataagcttgtagat
ggtaaaatagatcctattcctaacttgccagcagatttgtcaagagaaataagcgggctt
aatcaggttctacatttttatcctgcaaatggtggaacaccaagatatatgactccactt
ttgcaactacaggcagatatgcaggctttaaatgaaaagctcaatattcttgttccaaac
ccagcagaagcgttgataggtatgtcagatacctatatcaaacgcggtgtcacacttgat
aatatgattgaggatgcacgtgttaagtatattactggtcagctcaatgaccagggcttc
aagaaagttcttgacaactggagaaagcagggtggagaccagattataaaagaagtaaat
gcactgtatcgtaagtacaaaaagaatattccatataaagaggacttgtataagattctc
aattaa
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