Caldicellulosiruptor diazotrophicus: CaldiYA01_06420
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Entry
CaldiYA01_06420 CDS
T08057
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia03030
DNA replication
cdia03430
Mismatch repair
cdia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CaldiYA01_06420
03430 Mismatch repair
CaldiYA01_06420
03440 Homologous recombination
CaldiYA01_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdia03032
]
CaldiYA01_06420
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_06420
Enzymes [BR:
cdia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CaldiYA01_06420
DNA replication proteins [BR:
cdia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CaldiYA01_06420
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CaldiYA01_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Tma16
NPHP3_N
DNA_pol3_delta2
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
BCS80682
LinkDB
All DBs
Position
710650..711657
Genome browser
AA seq
335 aa
AA seq
DB search
MAEKSKEIIKELNSQLLKKDFKKIYLFYGQEIFLIDEYTRRFSHAIVGGNLNNIVKFDGE
TANYNDIINEMFSISFDLEPRVLIFKNFFKYASTNSSLNLSAIIDNLKNFKSDSTYIIFK
EYEAKENKLFSALKQIAFSADLVQPSMPDLVKWVQNVMSKEGKTISDNMAQEIILHYNKD
MMLIYNYLQVLISYLGKRSKVTHDDILKTLTDNPQDHIFQMLDAFASKDTEGGYKYLREL
YQLRTSVSKILALILRHFKILGMLKEMQETNKKQIAKQLGILEFFIDKYKKQAETFTIDK
IKSIIQKTIEYEYMIKKGQIDDETALEMLLYQIVK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaaaaatcaaaagagattataaaagaattaaattcgcagctcttgaaaaaggat
ttcaagaagatttaccttttttatggacaagaaatatttttgattgatgaatatacacga
cggtttagccatgccatagtaggtgggaatttgaacaatatagtaaagtttgacggtgag
actgcaaattataacgatataataaacgaaatgttttcaatatcttttgatttagagcca
agagtgctaatctttaaaaactttttcaagtatgcatctacaaactccagcttaaatctt
tctgctatcatagataatctcaagaattttaaaagtgacagtacttatataatctttaaa
gaatacgaagcaaaagaaaacaagctattttctgccctcaaacaaatagcattttctgca
gatcttgtgcagccttctatgcccgatttggtaaaatgggttcaaaatgtaatgtctaaa
gaagggaaaacaatctctgataatatggcacaggagattattcttcattacaacaaagac
atgatgcttatttacaactatttacaagttcttatttcgtatcttggtaaaaggagtaag
gttactcatgatgatatattaaagacattaacagacaacccacaagaccatatattccag
atgcttgatgcttttgcctcaaaagacacagaaggtggttataagtatctgagagagcta
tatcagctcaggacaagtgtcagcaagattttagctttgattttgcgtcattttaagata
cttggaatgttaaaagagatgcaggagacaaataagaaacagattgcaaaacagcttggt
attcttgaattctttattgacaagtacaaaaaacaggcagaaacctttaccattgacaag
ataaaatctataatccaaaaaaccatagaatatgagtacatgataaaaaaagggcaaatt
gatgatgagacagcgcttgaaatgcttttgtaccagatagtaaaataa
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