Caldicellulosiruptor diazotrophicus: CaldiYA01_06950
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Entry
CaldiYA01_06950 CDS
T08057
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CaldiYA01_06950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_06950
Enzymes [BR:
cdia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CaldiYA01_06950
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CaldiYA01_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCS80735
LinkDB
All DBs
Position
complement(765459..766016)
Genome browser
AA seq
185 aa
AA seq
DB search
MLTWEELENACLSCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAG
KFLDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLRAQIKLISPKIIVC
LGATAMKYILGKDLKITQDRGKWFEKGGFLIMATYHPAALLRDPGKREDFYRDLKSVKEK
LEKIK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctaacatgggaagaacttgaaaatgcatgtctttcatgtgaaaaatgccctatttct
aaaaatcgcacaaacgttgtggtgggtgatggaaacaaaaatgcaaagcttgtatttgtt
ggcgaagctcctggtgaagaagaagacaagcaagggaaaccgtttgtaggaagagcagga
aagtttttggacttggctttgacttctctggagctttcaagagaaaaagatttttatatc
tgcaacattttaaagtgtagaccaccaaacaatcgcgtcccaacagaagtggaggctcaa
aactgcttgccttttttgagagctcagataaaacttatctctccaaaaataattgtctgc
ctcggtgcaactgccatgaaatatattcttggcaaagaccttaaaatcactcaagacaga
ggaaaatggtttgaaaaaggtggttttttgattatggctacataccatccagcagcactt
ttaagagacccaggcaaaagagaggatttttacagagatttaaaaagtgtaaaggagaag
ctggagaaaataaaatag
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