Caldicellulosiruptor diazotrophicus: CaldiYA01_07250 Help Entry CaldiYA01_07250   CDS       T08057                                  Symbol polC Name (GenBank) DNA polymerase III PolC-type   KO K03763   DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] Organism cdia  Caldicellulosiruptor diazotrophicus Pathway cdia03030   DNA replication cdia03430   Mismatch repair cdia03440   Homologous recombination Brite KEGG Orthology (KO) [BR:cdia00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CaldiYA01_07250 (polC)    03430 Mismatch repair     CaldiYA01_07250 (polC)    03440 Homologous recombination     CaldiYA01_07250 (polC)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cdia03032]     CaldiYA01_07250 (polC)    03400 DNA repair and recombination proteins [BR:cdia03400]     CaldiYA01_07250 (polC) Enzymes [BR:cdia01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      CaldiYA01_07250 (polC) DNA replication proteins [BR:cdia03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     DNA polymerase III holoenzyme      CaldiYA01_07250 (polC) DNA repair and recombination proteins [BR:cdia03400]  Prokaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     DNA polymerase III holoenzyme      CaldiYA01_07250 (polC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 Rv2179c-like RNase_H_2 DEDDh_C HHH_3 T2SSK DNA_pol_A_exo1 tRNA_anti-codon Motif Other DBs NCBI-ProteinID:  BCS80765 LinkDB All DBs Position 797199..801407 Genome browser AA seq 1402 aa AA seqDB search MSEALFLPVKPVKIEFDKSSMDLKVYVESLDNLKDIDLIGIEQRFKSLLESCRDVEIKLF KTRNLTLEELLKKYRWFLFYKISKRCNGLSHFLRECEIVQSSSGLDFLVPNGIRDILFER KVDVLVKQILSEEFGIVCDVDFKIKDFFIQFDTDQEVEKYLRLSEEKKEETEKITSEKNE VETDPTIIFGKKIDEKKEVTPISLVKVGTDCVIEGEIFNLEIKETKNQNVLIYKLYITDY LNSTFVKIVAKKDKIPTSISVGDYVKVEGRVEFDDFEKAVVVNAKNINKSQKPQRLDTSD NKRVELHAHTKMSAMDAVCSAEEIIKLAASMGHRAVAITDHGVVQAFPEAQEASKSCNIK VIYGMECYLIDDGAPVVYNPKEGQGFDSTFVVVDIETTGFDSQRDRIIEIGAVKIENGQI TERFSTFVDPEGKIPVRISELTGIYQDMVDKAPKLSDVILEFEKFASGSVLVAHNAQFDI GFLKKAYHECGIIFDYTYIDTLELSRRLLTDLSSHKLNKVAEFLNIELKHHHRADSDAET TAGIFISLVERLKARGYKWLKEFNSIESNAKADLKSHSYHATILVKNQQGLKNLYKLVSY SHLEYFYKRPRIPKSLLIQLKDGLLIGSACESGEIFRAFLEGKSEEEIEKIAAFYDFLEI MPVENNSFLIREGYLKDEEDLREINKKIYNLGKKLGKLVVATSDAHYCHPHQRVLRQILK HNQGYDDVENDPQLYFRTTDEMLKEFEYLGSDACYEVVVENTNKIADMIEDVKPIPDETF PPKIEGAEEEIYNMTMKKAHEIYGDPLPEIVRARLEKELNSIIKNGFAVMYLIAQKLVSK SLSDGYLVGSRGSVGSSLVATMCGITEVNPLPPHYVCPHCKYSEFITDGSVGCGYDLEDK NCPRCGEKLKKDGHDIPFETFLGFDGDKEPDIDLNFSGDYQPIAHKFTEELFGQGYVFRA GTISTVAEKTAHGFVTKYAEEKGLSLHPAEILRLSQGCTGVKRTTGQHPGGLMIVPRDKE IFDFTPIQHPADSTDKSVITTHFDYHAISGRLLKLDILGHDDPTVIRMLQDLTGVDPRSI PLDDKDTMSIFTSTEALGISPEDIDCEVGTFGIPEFGTRFVRQMLIETKPKTFAELVRIS GLSHGTNVWTNNAQDLVRNGIATLKEVISTRDDIMLYLIQKGVPPKDSFRIMEDVRKGKG LKPEDEQLLRAHNVPDWYIESCKKITYMFPKAHAAAYVMMAFRIAYFKVHYKEAFYATYF TVRADDFDYATIIKGRDAIRQKIRDLENRISSLSQKDKNLLTVLEIANEMLARGLKFYPV DLNESDAERFIIKDGGLLIPFSALPNVGVAAAKSIVEARKEGRFLSVDDLIRRAKLNKQV IEILTQYKVLKDLPQTSQLSFF NT seq 4209 nt NT seq  +upstreamnt  +downstreamnt atgagtgaggctctatttttgccagtaaaacctgttaagattgagtttgacaaatcaagt atggatcttaaggtttatgttgagagccttgataacctgaaagatattgacctcattgga attgaacaaagattcaagtctcttttagaaagttgcagagatgttgagataaaactcttc aaaaccagaaacctgacgttggaagaacttttgaaaaaatatagatggtttttgttttat aagatttcaaaaagatgtaacggtcttagccattttttgagagaatgcgagattgtgcaa agttcaagcggcttagattttttggttccaaatggtatcagagatattctttttgaaaga aaagtagatgtgcttgtaaagcaaatactgtctgaagagttcggaatagtatgcgacgtg gattttaagattaaagacttttttatccagtttgatacagaccaagaagtagaaaaatat ctaaggcttagcgaggaaaagaaagaagaaacagaaaaaattacaagtgaaaagaatgag gttgagacagacccgaccattatatttggcaaaaagatagatgaaaagaaagaggtaact cctatttctcttgtcaaagttggtactgattgcgtgatcgaaggtgaaatttttaatctt gagataaaagagactaaaaaccaaaatgtgctcatatacaagctttacatcacagactat ttaaattcaacctttgtaaaaattgttgctaagaaagataaaattcctacttcaatttct gttggagattatgttaaggttgaaggcagggtagaatttgacgattttgaaaaagcggtt gtggttaatgctaaaaacataaacaaaagtcaaaaacctcagcgacttgatacaagcgat aacaagagagtagaacttcatgctcacaccaaaatgtctgctatggatgctgtgtgctct gcagaggagattataaaattggcagcttcaatgggacacagagcagttgcaataacagac catggagttgttcaagcgtttccagaagcacaggaggctagcaaaagctgtaatatcaaa gttatctatgggatggaatgctatcttattgatgacggcgcgccagttgtttacaatcct aaggaaggacaaggatttgactctacctttgtggttgttgacattgaaacaacagggttt gacagtcagagagatagaataatagaaattggtgctgtgaagatagaaaacggtcaaata acagagagattttctacatttgtcgaccccgaaggcaaaatccctgtcaggatatcagag ctaacaggcatataccaagatatggttgataaagccccaaagctgagtgacgtcatttta gaatttgaaaagtttgcgagcggtagcgttcttgttgcgcacaacgctcagtttgatatt ggatttttgaaaaaggcgtaccatgagtgtggaattattttcgactatacatatatcgat acgctggaactttcaagaaggcttttgacagacctttcttctcataagttaaacaaagtt gctgagtttttaaatatagagttaaaacatcatcacagagctgattctgacgcagaaaca acagctggtatctttatttctcttgtggaaagattaaaagcaagagggtacaaatggtta aaagaatttaattcaattgagtcaaacgcaaaagcagacctcaagtctcacagctatcat gcaactatacttgtaaagaaccagcaggggttaaaaaatctctacaaactggtatcgtat tctcatttagaatacttctataaaaggccaaggatacccaaaagtcttttgatacaatta aaagatggacttttgataggaagtgcgtgtgagtccggtgaaattttcagggccttttta gaaggaaaaagtgaggaagagatagaaaagatagcagcattttatgatttccttgagata atgccggttgagaataattcttttttgattagagaaggatacttaaaagatgaagaagat ttaagagaaatcaataaaaagatttacaatcttggcaaaaaacttggcaagcttgttgtt gcgacatctgatgcgcactattgtcatccacaccagagagtgttgcgccagattttaaaa cataaccaagggtacgatgatgttgaaaatgacccacagctttatttcagaacaactgat gaaatgctcaaggaatttgaatatcttggcagtgatgcttgttatgaagttgttgtagaa aataccaataagattgccgatatgatagaagatgtaaaaccaatacccgatgagactttc ccacccaagattgagggtgctgaggaagaaatatacaacatgacaatgaagaaagctcac gaaatatatggagaccctcttccggaaattgtaagagcacggcttgaaaaggaactgaat tcgataatcaagaatggttttgcggtgatgtatttgattgcccaaaaacttgtatctaaa tctttgtcagatgggtatcttgttgggtcacgagggtctgttggttcttctcttgttgcg acaatgtgtgggataacagaggtaaatccgttgcccccacattatgtttgtccacactgt aagtattccgagtttataacagatggttctgttggatgtggttatgacttggaagacaaa aactgtccacgctgtggggaaaaacttaaaaaagatgggcacgacataccgtttgagacc tttttgggatttgatggggataaagaacctgatattgaccttaacttttctggtgattat cagccaattgcacacaagtttacagaagaactgtttggacaaggttatgtgttcagagct ggtacaatatcaacagttgcagaaaagacagcacatggttttgtaacaaagtatgcagaa gaaaaaggtttgagtcttcatcctgcagagattttgagactttctcagggttgcacagga gtaaaaagaacaacaggccagcatcctggggggcttatgattgttccaagagacaaagag atatttgattttacaccaatccagcatccggcagatagcactgacaaaagcgttatcaca acgcactttgattaccatgctatctcaggaagacttttgaagcttgatattcttggccac gacgacccgactgtcatacgaatgctccaggacttgacgggagttgacccgcgttcaatt cctcttgatgacaaagatacgatgtcaatttttacaagcacagaagctcttggaatttct cctgaggacatagattgtgaagtagggactttcggtatacctgagtttggtacaagattt gtaagacagatgttaattgagacaaaaccaaagacgtttgctgaacttgttcgtatttca ggtctttcgcatggcacaaatgtgtggacaaacaatgctcaggatttagtaagaaatgga attgcaacgctcaaagaggtaatttctacaagagacgatattatgttatatttaattcaa aagggtgttccaccaaaagacagtttcagaatcatggaagatgttagaaaaggtaaagga ttaaagccggaggatgagcagcttctaagagctcacaatgtaccggactggtatatagag agttgcaaaaagataacgtacatgttcccaaaagcacatgctgcagcgtatgtaatgatg gcgttcaggattgcatatttcaaagtacattataaggaggctttctatgcaacatatttt acagtcagagcagacgactttgattatgcaacaatcatcaaggggagagatgctataagg cagaagataagggatttggaaaacaggataagtagtctttctcagaaagacaaaaacctt ctgacagtgcttgagattgcaaatgaaatgttagcacgaggtctaaaattttaccctgtt gatttgaatgagtctgatgcagagaggttcatcataaaagatggaggacttttaatacct tttagtgctctgccaaatgttggggtggcagctgcaaaaagtattgttgaggcgagaaaa gaaggaaggtttttgtcggtggatgaccttataagacgtgcaaagctaaacaagcaggta atagagattttgactcagtataaagtgttgaaagacttgcctcaaacaagtcagctaagc tttttctaa

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