Caldicellulosiruptor diazotrophicus: CaldiYA01_10780
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Entry
CaldiYA01_10780 CDS
T08057
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia03030
DNA replication
cdia03410
Base excision repair
cdia03420
Nucleotide excision repair
cdia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CaldiYA01_10780 (polA)
03410 Base excision repair
CaldiYA01_10780 (polA)
03420 Nucleotide excision repair
CaldiYA01_10780 (polA)
03440 Homologous recombination
CaldiYA01_10780 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdia03032
]
CaldiYA01_10780 (polA)
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_10780 (polA)
Enzymes [BR:
cdia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CaldiYA01_10780 (polA)
DNA replication proteins [BR:
cdia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CaldiYA01_10780 (polA)
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CaldiYA01_10780 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CaldiYA01_10780 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
CABIT
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BCS81118
LinkDB
All DBs
Position
1139308..1141860
Genome browser
AA seq
850 aa
AA seq
DB search
MKLVIFDGNSILYRAFFALPELTTLSNIPTNAIYGFVNVLLKYLEQESPDYVAVAFDKKG
RQARKSEYEEYKANRKPMPDNLQVQIPYVREILYALNIPIVEFEGFEADDVIGTLVNKFK
NTGLDIVIITGDRDTLQLLDKNVVVKIVSTKFDKTVEDLYTVENIKEKYGVWANQVPDYK
ALVGDQSDNIPGVKGIGEKSAQKLLEEYSSLEEIYQNLDKIKGSIREKLEAGKDMAFLSK
RLATIVCDLPLNVKLEDLRTKEWNKERLYEILVQLEFKSIIKRLGLSEVVQFEFVQQRTD
IPDVEKKELESISQIIAKEIPLMFVPDEKCFYLYDQESNTVFVTKDRHMIEKILQSEAVK
IVYDLKSIFHELNLKDTNNVKNCEDVMIASYVLDSTRSSYNIETLFVSYLNTDIEAVKKD
KKMVSVVLLKRLWDELSRLIDLNSCRFVYENIERPLIPILYEMEKAGFKVDRDVLLQYTK
EIESKILKLETQIYQIAGEWFNINSPKQLSYILFEKLKLPVIKKTKTGYSTDAEVLEELF
DKHEIVPLILDYRMYTKILTTYCQGLLQAINPSSGRVHTTFIQTGTATGRLASSDPNLQN
IPVKYDEGKLIRKVFVAEEGHVLIDADYSQIELRILAHISEDERLINAFKNNVDIHSQTA
AEIFGVDIADVTPQMRSQAKAVNFGIIYGISDYGLARDIKISRKEAAEFINRYFERYPKV
KEYLDNIIKFARDNGYVLTLFSRRRYVKDIKSANRNARSYAERIAMNSPVQGSAADIMKL
AMIKVYQKLKKNNLKSKVIMQVHDELLIEAPYEEKDIVKRIVKREMENAVALKVPLVVEV
KEGLNWYETK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagttatatttgatggaaatagtattttatatagggctttttttgctcttcct
gaactaacaactttgagcaatatcccgacaaacgctatttatggttttgtaaatgtgtta
ttaaaatatttagagcaagagagtcctgattatgttgcggttgcgtttgataaaaaagga
agacaggcacgcaaaagcgagtacgaagaatataaagctaacagaaaacctatgccagat
aaccttcaagtacaaattccttatgttcgagaaattctttatgccctcaacattccaatt
gttgagtttgaaggatttgaggcagatgacgtaattggcacacttgtgaataagtttaaa
aatactggtttggatattgttattatcacaggtgacagagatactcttcagttgctcgac
aaaaatgtagttgtgaagattgtttcaacaaaatttgataaaacagtagaagatttgtac
actgtggaaaatattaaagaaaaatatggggtttgggcaaatcaagtgcctgattataaa
gctcttgttggagatcaatcggataacattcccggggtaaaaggaattggtgaaaagagt
gcgcagaagcttttggaggaatactcatctttggaagaaatataccaaaatttagataaa
attaagggttctatccgtgaaaagttggaagcaggaaaagacatggcatttttgtccaaa
cgcttagcaacaattgtatgtgatttaccactaaatgttaaacttgaagatttgagaaca
aaagaatggaacaaggaaaggctatatgagattttggtccagttggagttcaaaagcata
ataaaacggctagggctatcagaagtggttcaatttgaatttgttcagcaacgaactgat
atccctgacgtagagaaaaaagagcttgaaagcatttcacaaataatagcaaaagagatt
ccattaatgtttgtaccggatgaaaagtgtttttatttgtatgatcaagaaagtaatact
gtgtttgtaaccaaagatagacatatgatagaaaaaattttacaaagcgaagccgtgaaa
atcgtatatgatttaaaaagtatatttcatgaacttaatttgaaagatacgaataatgtt
aaaaattgtgaggatgtaatgattgcttcttatgttcttgatagtacaaggagttcatat
aatatagaaacattgtttgtatcctacttaaacaccgatatagaagctgttaaaaaggat
aaaaagatggtttcggtagtcctgttaaaacgattatgggatgaactttcaagattgatt
gatttaaattcatgcaggtttgtgtatgaaaacatagaacgtcctcttattccaattcta
tacgagatggaaaaagcagggtttaaggtagacagagatgtcctgctccagtataccaag
gagattgaaagcaaaatattaaaacttgaaacgcagatataccaaattgcaggtgagtgg
tttaatataaactcgcccaaacagctttcttacattttatttgaaaagttaaaacttcct
gtgatcaagaagacaaaaacaggatactccaccgatgccgaggttttagaagagcttttt
gacaaacatgaaatagttcctcttattctggactacaggatgtataccaagatactaaca
acctattgtcagggattactccaggcaataaatccttcttccggcagggttcatacaaca
tttattcaaacaggtacagcaacaggaaggcttgcgagtagcgatcctaatttgcaaaat
atacctgtgaaatatgacgagggaaagttgataagaaaagtttttgtagctgaagaaggg
catgtactgattgatgcggattattcccaaattgagttgaggatacttgcccatatttct
gaagatgaaagacttataaatgctttcaaaaacaatgttgacatccattcacagacagca
gctgagatttttggagtagacatagctgatgttactccacagatgagaagtcaagcaaaa
gcagtaaattttggtataatttatggaatttctgattatggtcttgcaagggatattaag
atttccaggaaagaagctgcagaatttataaacaggtattttgagcgttatcctaaagtt
aaagagtatttagataatattatcaaatttgctcgtgataacggatatgttttgacttta
tttagcagaaggagatatgtaaaggacataaaatctgcaaataggaatgcaagaagctat
gccgaaaggattgcaatgaattcgccagttcagggcagcgctgctgatatcatgaaattg
gcgatgattaaggtgtatcaaaaacttaaaaaaaacaatcttaaatcgaaagtaattatg
caggtacatgatgagcttttaattgaagctccatacgaagaaaaggatatagtaaaaaga
attgtaaaaagagaaatggaaaatgcagtagctttaaaagtgcctctggtagttgaggta
aaagagggtctgaactggtatgagacaaaataa
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