Caldicellulosiruptor diazotrophicus: CaldiYA01_10800
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Entry
CaldiYA01_10800 CDS
T08057
Name
(GenBank) transglycosylase SLT domain protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdia01011
]
CaldiYA01_10800
Enzymes [BR:
cdia01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CaldiYA01_10800
Peptidoglycan biosynthesis and degradation proteins [BR:
cdia01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CaldiYA01_10800
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_4
SLT_2
Phage_lysozyme2
DUF2633
Motif
Other DBs
NCBI-ProteinID:
BCS81120
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Position
1142443..1143006
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AA seq
187 aa
AA seq
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MKKKVIIIVLLIVFLLFFERFYFFVLKQIYPLKFSESISKYSSEIGVDPYLICAIIKSES
NFNQYAVSRKGAVGLMQLSPSTAKWIAQKLKTEYVEDSLYNPDYNIRLGSWYIKYLIDYY
SGDTKLAVAAYNAGMTNVNKWLSIRKRSTIEITEIPFKETNYFVKRVFKSYEMYKKLYPK
AFKNTDY
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaagaaggttattataatagtcttgctaattgtttttcttttattctttgaaaga
ttttatttttttgtcctaaagcaaatatatccactgaaattttctgaaagtataagtaaa
tatagcagtgaaataggggtagacccatatttgatatgtgcaataataaaatctgaaagt
aactttaaccagtatgcagtttcgagaaaaggcgccgttggactcatgcagctttcacct
tcaactgcgaagtggattgctcaaaagcttaaaacggaatatgtagaagatagcctctat
aatcctgattacaatataagacttggttcgtggtatataaaatatcttatagactactac
tctggcgatacaaagcttgcagttgcagcttacaatgctggtatgacaaatgtaaataag
tggctttcgattagaaaaagaagcactattgaaataacagaaattccttttaaagagaca
aactattttgtaaaaagagtttttaaaagttatgagatgtacaaaaaactttatccaaaa
gcatttaaaaatacagattattga
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