Caldicellulosiruptor diazotrophicus: CaldiYA01_10810
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Entry
CaldiYA01_10810 CDS
T08057
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CaldiYA01_10810 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_10810 (uvrB)
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CaldiYA01_10810 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CaldiYA01_10810 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
nSTAND3
Kinesin
Microtub_bd
Flavi_DEAD
NPHP3_N
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
BCS81121
UniProt:
A0ABM7NLW6
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All DBs
Position
1143087..1145072
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AA seq
661 aa
AA seq
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MKKFKLVSDFKPTGDQPKAIEMLTEGILKGEKFLTLLGVTGSGKTFTMAKVIENVQRPTL
VLAHNKTLAAQLCSEFREFFPENAVEFFVSYYDYYQPEAYIPETDTYIEKDSSINEEIDK
LRHSATSALFERRDVIIVASVSCIYSLGSPEDYLNLTISLRPGMIKDRDEVIRELIRMQY
ERNDIDFGRGRFRVRGDILEVFPASTTERAIRIEFFGDEIERITEFDVVTGEIIGRRNHV
AIFPASHYVTTAEKLKKAIKSIEEELEQRLKELRSMGKLVEAQRLEQRTRYDIEMLQEMG
FCKGIENYSRHLTGRPPGSPPYTLLDYFPKDFIMFIDESHVTIPQVRAMYNGDKARKDAL
VEYGFRLPSAYDNRPLTFEEFEEKINQVIFVSATPGPYELKKSSRIVEQIIRPTGLVDPE
IEVHPVKGQIDHLIGEIRKRVEKNQRVLITTLTKKMAESLTDYLKDVGIRVRYMHSDIDT
IERMQIIRDLRLGKFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNVDGKVIMYADRVTNAMQRAIDETNRRRKIQIEYNQKHGIVPQTVRKGIRQIIEATVS
VAEEEEKYEVVEKDIVENMTKEEIEEYIKELEQEMKKLAIELEFEKAAKVRDKIFELRKF
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaagcttgtttctgacttcaaaccaactggtgaccagccaaaagcaata
gagatgttaacggaaggcattttaaaaggcgaaaaatttctgactcttttgggtgttact
gggtctggcaagacatttacaatggcaaaagtcattgagaatgttcaaagacccacgctt
gtgctggcacataacaagactttagcagcacagctttgtagtgagtttagagaatttttc
ccagaaaatgcagttgaattctttgtaagctactatgactattatcagcctgaagcatat
attccagaaactgacacatatattgaaaaggattcgtctataaatgaagaaattgataag
ctcagacactcagctacgtctgctttatttgaaagaagagatgttataattgtggcaagt
gtatcttgtatctacagtttgggtagtcccgaggactatttaaaccttaccatctctttg
cgccctggcatgataaaagacagagacgaggtcataagagagcttataagaatgcagtat
gaaagaaatgatatcgattttggaagaggcagatttagagtaagaggagacatacttgaa
gttttccctgcatctactacagagagggcgataagaatagaattttttggggatgagata
gaaagaattacagagtttgatgttgtgacaggtgaaataattgggcgaaggaaccatgtt
gcaatatttccagcatctcattatgtaacaacagcagagaagttgaaaaaagcgataaaa
agtatagaagaagaacttgaacagaggctaaaagagctaagaagtatggggaagcttgtt
gaagctcagaggttagagcagagaacgcgttatgatatagagatgcttcaggaaatgggt
ttttgcaaaggaatagagaactactcaagacacttaactggcaggccaccaggaagtcca
ccgtatactttgcttgattattttccgaaggatttcataatgttcattgacgagtcacat
gttactatacctcaagtaagagctatgtacaatggcgataaagcaagaaaagatgccctt
gttgaatatggttttagacttccatcagcatacgacaacagaccattgacatttgaagaa
ttcgaagaaaaaatcaaccaagtaatttttgtaagtgcaacacccgggccgtatgaactc
aaaaaatcttcacgcattgttgaacaaattataagaccgacagggcttgttgacccagaa
attgaggttcatcctgtaaaaggtcagattgaccatctaattggtgaaatacgaaaacga
gtggaaaagaaccagagagttctcattactacacttactaaaaagatggctgaaagcctt
actgactatttaaaagatgtgggaatcagagttagatatatgcattcagacatagacaca
attgagcgtatgcagattataagagatttacgacttgggaagtttgatgttttagtaggg
ataaatctgctcagagaaggtcttgaccttcccgaggtatcacttgttgctattttggat
gctgacaaggaaggttttttgaggtcagagacttcgcttatccagacgattggacgtgct
gcaagaaatgttgatggaaaggttataatgtatgcagatagagtaacaaacgctatgcaa
agagccattgatgagacaaaccgacgtaggaaaattcagatagaatacaatcaaaaacac
ggtattgtacctcaaactgtaagaaaaggtataaggcagataattgaagctaccgtgtct
gtggctgaagaggaagagaaatatgaagttgtggagaaagacattgtagaaaatatgaca
aaggaagaaatagaagaatatatcaaggaacttgaacaggagatgaaaaagcttgctata
gaacttgagtttgagaaggctgcaaaagtgagagacaaaatatttgaactcagaaaattt
ctttaa
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